Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0562 ATGGATTCCGCGCAAATGGGGTTTTTCAGAGCTCTGAACCACCATTTCAGCAGAGCTCCGCTTACTCCATGCATACCCACAGTTATTCTCCATCCCAGGGTCAAATGCATTGCTCAAAGTCACAACTATGCCACTCGCAAGTCCAGCTCTTTTGCTTCGCCGCCCTCGCTTAGGAGCCTTTGTGCTGTGGGCAGCCGAGGGCCCTGTCGATTCCAGTGCGTTTCGAGCTCTGCTGCTCACTTGGCTTCTTCTGGCTCCGGAAATGGCCGGGTTGGTGGCGGCGGCGGCGGAGGCAACGGTGGCGGCGGCGGTGATTCTGGAGATGCCAATCCCAAATTGGTTGGCGAAGGGGCTAAAGAGCTCTCGGCACTTTCTCCTGATGTTATCATTCTCGATGTTGGGGGAATGGTGTGCGGCGGATGTGCAGCTAGTGTGAAAAGAATTATAGAAAGTCGACCTCAAGTGTTATCTGCTAGTGTAAATCTAACAACAGAGACAGCAATAGTTTGGCCTGTATCTGAAGCAAAAAATGTACCAAACTGGCAAAAGCAACTAGGGGAGGCACTTGCAGAGCATTTGACTAGCTGCGGTTTCAAGTCTAGCCTACGAGATTCAGCAAGAGACAGTTTCCTCCAAGTTTTCGAAAGGAAGATGGAGGAAAAACGCAGACAATTGAAAGAAAGTGGTCGCGAGTTAGCTGTTTCCTGGGCTCTCTGTGCTGTCTGCCTTGCTGGCCATCTCTCTCATTTCTTTGGAGCAAAGGCACCATGGATCCATGCATTCCATTCCACTGGGTTCCATCTTTGCCTGTCTTTGTTTACATTGCTTGGTCCTGGGCGCCAACTTATTCTTGATGGCATAAAAAGCCTCCTTAAAGGGGCACCAAACATGAACACCTTAGTTGGTCTTGGGGCTTTATCATCATTTACTGTCAGTTCATTTGCTGCCTTGCTGCCAAAATTGGGATGGAAGGCTTTCTTTGAGGAACCAATTATGCTAATTGCATTTGTCTTGTTAGGAAGGAATCTTGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACAGGACTTTTTAGTATATTACCATCAAAAGCTCGTCTTCTGGTTAGCAATGACACTGCAGAATTTGGATCGAGTGTTGAGGTTCCTTCAGACAGTCTCTCTGTTGGGGATCAAATTCTTGTGCTACCTGGAGATCGTATCCCAGCAGATGGAACTGTCAAAGCTGGCAGAAGCACTGTAGACGAGTCAAGCTTTACTGGAGAGCCACTGCCAGCAACAAAGTTACCTGGGAGTCAGGTTGCGGCTGGAAGTATAAATCTTAATGGCACTCTTACCATTGAAGTACAAAGACCAGGCAGCGAGACTGCTATGGGAGACATAGTTCGTTTGGTTGAAGAAGCACAGAGTAAGGAAGCTCCAGTACAACGTTTGGCTGACAAGGTGGCTGGACACTTCACTTGTGGAGTAATGGCAGTTTCTGCAGCTACATTTACATTCTGGAGTTTGTTTGGCACACGCATTCTACCTGCTGCTTTATATCAAGGAAGTGCAGTTTCTCTGGCATTGCAACTTGCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCACTTGGGTTGGCTACACCTACAGCTGTTCTGGTTGGAACTTCTTTGGGAGCTACGAGAGGATTACTCTTGCGAGGTGGAAACATTCTAGAGAAGTTTTCAATGGTTAATGCTGTCGTGTTTGACAAAACAGGGACCCTCACAATTGGTAGACCTGTTGTGACAGAGATTATCAATACAAGTGGACAAAACAAAAACTTAAGGCAAACTGCCGACGATGCTTGGTCAGATGTTGAAGTTCTGAGGTTAGCTGCCGGAGTAGAATCAAATACAGTACATCCAGTTGGGAAAGCAATTGTGGAAGCCGCTCAGGCATTTAATTGTCATAGTGCTAAGGCAGAAGATGGAACATTCCTGGAAGAACCTGGATCTGGTGCAGTAGCAACCATTGATAACAATAAGGTTTCTGTTGGGACTTTGGAATGGGTCATGAGGCAGGGAATTAAGAAAAATATTCATCGAGAAGTGGAGGAGTATAAAAATCAGTCTGTTGTCTATGTTGGAGTTAATGATACTCTAGCTGGCCTCATTTATTTTGAAGACCAGATAAGGGAAGACGCGAGGCATGTTGTTGAAGCATTGTCTAAGCAAGGCATTGGTGTATACATGCTTTCTGGAGACAAAAGGAGTACAGCTGAGTACGTTGCATCTGTTGTTGGAATTCCTAAGGAGAAGGTGCTATCTGGAGTGAAACCAGATCAAAAAAAGTTTTTTATAAATGAACTCCAGAAAGATCAGAGAATTGTAGCTATGGTTGGTGATGGGATCAATGATGCAGCTGCCTTGGCTGCGTCACATATTGGTATTGCATTAAGTGGAGGTGTTGGAGCTGCAAGTGAGGTGTCTTCCATTGTGCTGATGGGCAATAAGCTCTCTCAGTTACTTGATGCTTTGGATCTTAGCAAGCTAACCATGAAGACAGTGAAACAAAATCTCGGGTGGGCTTTCCTATACAACATTGTTGGAATTCCAATTGCAGCTGGATTGTTATTTCCAATAAATGGGACAATGCTGACTCCATCAATTGCAGGGGCTCTCATGGGTTTGAGTTCCGTTGGGGTAATGACAAACTCGTTACTTCTGAGATTCAGATTTTCCACAAAGCAAAAGCAAAAACAAAAACATGGGGCATTCCCAAAGACCCAAAACCATGTAGATGGTGATCTTGAAGAGCTAAAAATGAAATTGAAATCTGGACAATAA 2814 0.4534 MDSAQMGFFRALNHHFSRAPLTPCIPTVILHPRVKCIAQSHNYATRKSSSFASPPSLRSLCAVGSRGPCRFQCVSSSAAHLASSGSGNGRVGGGGGGGNGGGGGDSGDANPKLVGEGAKELSALSPDVIILDVGGMVCGGCAASVKRIIESRPQVLSASVNLTTETAIVWPVSEAKNVPNWQKQLGEALAEHLTSCGFKSSLRDSARDSFLQVFERKMEEKRRQLKESGRELAVSWALCAVCLAGHLSHFFGAKAPWIHAFHSTGFHLCLSLFTLLGPGRQLILDGIKSLLKGAPNMNTLVGLGALSSFTVSSFAALLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLFSILPSKARLLVSNDTAEFGSSVEVPSDSLSVGDQILVLPGDRIPADGTVKAGRSTVDESSFTGEPLPATKLPGSQVAAGSINLNGTLTIEVQRPGSETAMGDIVRLVEEAQSKEAPVQRLADKVAGHFTCGVMAVSAATFTFWSLFGTRILPAALYQGSAVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGATRGLLLRGGNILEKFSMVNAVVFDKTGTLTIGRPVVTEIINTSGQNKNLRQTADDAWSDVEVLRLAAGVESNTVHPVGKAIVEAAQAFNCHSAKAEDGTFLEEPGSGAVATIDNNKVSVGTLEWVMRQGIKKNIHREVEEYKNQSVVYVGVNDTLAGLIYFEDQIREDARHVVEALSKQGIGVYMLSGDKRSTAEYVASVVGIPKEKVLSGVKPDQKKFFINELQKDQRIVAMVGDGINDAAALAASHIGIALSGGVGAASEVSSIVLMGNKLSQLLDALDLSKLTMKTVKQNLGWAFLYNIVGIPIAAGLLFPINGTMLTPSIAGALMGLSSVGVMTNSLLLRFRFSTKQKQKQKHGAFPKTQNHVDGDLEELKMKLKSGQ 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0562 937 CDD P-type_ATPase_Cu-like 230 900 - -
Bisa07g0562 937 Gene3D - 568 839 IPR023214 -
Bisa07g0562 937 Gene3D - 588 720 IPR023299 GO:0000166
Bisa07g0562 937 SFLD p-type atpase 560 839 IPR044492 -
Bisa07g0562 937 SUPERFAMILY HAD-like 576 896 IPR036412 -
Bisa07g0562 937 Pfam E1-E2 ATPase 362 555 - -
Bisa07g0562 937 SUPERFAMILY HMA, heavy metal-associated domain 129 178 IPR036163 GO:0046872
Bisa07g0562 937 ProSitePatterns Heavy-metal-associated domain. 133 162 IPR017969 GO:0046872
Bisa07g0562 937 SUPERFAMILY Calcium ATPase, transduction domain A 378 466 IPR008250 -
Bisa07g0562 937 Gene3D - 128 205 - -
Bisa07g0562 937 PRINTS P-type cation-transporting ATPase superfamily signature 577 591 - -
Bisa07g0562 937 PRINTS P-type cation-transporting ATPase superfamily signature 416 430 - -
Bisa07g0562 937 PRINTS P-type cation-transporting ATPase superfamily signature 812 824 - -
Bisa07g0562 937 PRINTS P-type cation-transporting ATPase superfamily signature 712 723 - -
Bisa07g0562 937 PRINTS P-type cation-transporting ATPase superfamily signature 789 808 - -
Bisa07g0562 937 PRINTS P-type cation-transporting ATPase superfamily signature 734 744 - -
Bisa07g0562 937 SFLD Haloacid Dehalogenase 560 839 - -
Bisa07g0562 937 ProSitePatterns E1-E2 ATPases phosphorylation site. 579 585 IPR018303 -
Bisa07g0562 937 PANTHER ATP7, ISOFORM B 125 900 - -
Bisa07g0562 937 Pfam haloacid dehalogenase-like hydrolase 573 802 - -
Bisa07g0562 937 NCBIfam HAD-IC family P-type ATPase 380 598 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa07g0562 937 NCBIfam HAD-IC family P-type ATPase 620 871 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa07g0562 937 CDD HMA 131 201 IPR006121 GO:0046872
Bisa07g0562 937 FunFam Copper-transporting ATPase PAA1 chloroplastic 705 856 - -
Bisa07g0562 937 Gene3D - 348 470 - -
Bisa07g0562 937 SUPERFAMILY Calcium ATPase, transmembrane domain M 333 571 IPR023298 -
Bisa07g0562 937 Coils Coil 211 231 - -
Bisa07g0562 937 NCBIfam copper-translocating P-type ATPase 279 899 - -
Bisa07g0562 937 MobiDBLite consensus disorder prediction 84 114 - -
Bisa07g0562 937 FunFam Copper-transporting ATPase 1, putative 348 470 - -
Bisa07g0562 937 NCBIfam heavy metal translocating P-type ATPase 297 898 IPR027256 GO:0006812|GO:0016020|GO:0019829
Bisa07g0562 937 ProSiteProfiles Heavy-metal-associated domain profile. 127 201 IPR006121 GO:0046872
Bisa07g0562 937 Pfam Heavy-metal-associated domain 131 199 IPR006121 GO:0046872
Bisa07g0562 937 FunFam Copper-transporting ATPase PAA1 chloroplastic 588 720 - -
Bisa07g0562 937 FunFam Copper-transporting ATPase PAA1, chloroplastic 127 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0562 Bisa-ChrBisa07 13984561 14055699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0562 288 919 Primary Pumps ATPases AT1G63440 38.889 1.81e-121 392