Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0558 ATGAAATTGTTCTCGCCTGCTCGTGATGTCATGATGGTGCTATACGTTTCTTGTAATTTCATCAGTGTTATACTGTTGTCTTATAGTAATCTTGGTTCACTGCACCATACCCCAAACATGTCGCACTTCGGAAGGTCTGGTCCTCCTGACATCACTGACACCTACTCTCTTCTAGTGCTCAACATCACATTCCGTAAGCTCTATTCCTTGTCTTCTTCAGTTTGTACAACCGCCGATGACCTGTTTCCGCTGTTTGATAAATATGGCAAGGTCGTCGACATCTTCATTCCCAGAGATCGAAGGACTGGAGAATCGAGGGGTTTTGCATTTGTGCGTTATAAGTATGCTGATGAGGCACAAAAGGCAGTTGATAGGCTGGACGGTAGAGTGGTTGATGGCCGGGAAATAACTGTTCAGTTTGCAAAATATGGCCCTAATGCGGAGAGGATTCACAAAGGAAGGATTATTGAAACATCCCCAAAGTCTAGGTATAGGTCAAGGAGTCGCAGTCCAAGGAGAAGGCATCGTGATGATTACAAGGACAGGGATTACAAGAGGAGAAGTCGCAGCAGGAGTTATGATAGGTATGAAAGGGACAGGTATCGTGGAAGAGACAGAGATTATCGTCGCCGAAGCAGGAGCCGTAGTGCAAGCCCTGATTACTACAAGAGTCGGGGAAGGGGTCGCTACGATGATGAGCGTCGTAGCCGAAGTCGAAGTCGATCAGTGGATAGTCGTTCCCCTGCACGGCGCAGTCCAAGTCCTCGAAGGAGTCCTTCCCCCCAGAGGAGTCTTTCCCCTCAAAGAAGTATTTCGCCACGGAAGAGTCCAAGGGGTGAAAGCCCCGAGAGCCGTAGTCGTGATGGGCGATCTCCTTCACCTCGCAGTGTCTCACCACGTGGTCAACCTAACGATTCACGAAGCCCATCCCCTCGAAATTCCAATGGAGATGAATGA 957 0.489 MKLFSPARDVMMVLYVSCNFISVILLSYSNLGSLHHTPNMSHFGRSGPPDITDTYSLLVLNITFRKLYSLSSSVCTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIHKGRIIETSPKSRYRSRSRSPRRRHRDDYKDRDYKRRSRSRSYDRYERDRYRGRDRDYRRRSRSRSASPDYYKSRGRGRYDDERRSRSRSRSVDSRSPARRSPSPRRSPSPQRSLSPQRSISPRKSPRGESPESRSRDGRSPSPRSVSPRGQPNDSRSPSPRNSNGDE 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0558 318 MobiDBLite consensus disorder prediction 151 318 - -
Bisa07g0558 318 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 76 137 IPR000504 GO:0003723
Bisa07g0558 318 MobiDBLite consensus disorder prediction 291 318 - -
Bisa07g0558 318 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 53 279 - -
Bisa07g0558 318 FunFam Serine/arginine-rich splicing factor SC35 43 152 - -
Bisa07g0558 318 SUPERFAMILY RNA-binding domain, RBD 75 150 IPR035979 GO:0003676
Bisa07g0558 318 Gene3D - 44 153 IPR012677 -
Bisa07g0558 318 MobiDBLite consensus disorder prediction 247 275 - -
Bisa07g0558 318 MobiDBLite consensus disorder prediction 276 290 - -
Bisa07g0558 318 SMART rrm1_1 56 139 IPR000504 GO:0003723
Bisa07g0558 318 CDD RRM_SRSF2_SRSF8 57 139 - -
Bisa07g0558 318 MobiDBLite consensus disorder prediction 174 246 - -
Bisa07g0558 318 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 55 143 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0558 Bisa-ChrBisa07 13872603 13876557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0558 80 141 Eukaryotic Initiation Factors Gene Family AT3G11400 37.097 8.93e-09 53.9