Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0556 ATGATACTGCATCCCAAAACTATGCTGCTCAAGGCCTTTCTGTGCCTTTCTCTTATCTCCTCCATTTCTTTCTTCCATGATCACCATTATGCTTCAGCACTTTCTGGTTCTTCAAGCCCTGAAACAAACCAGGAAGAAGCAGAAGCACTTCTGAAATGGAAAACTAGCCTCTCTAACAAAAGCCAAGCCTTCCTTTCTTCATGGTCTCTCTCTCCTTCTCATTCAGAAACACCCACAAGCCCTTGTGGTTGGCTAGGCATCACCTGCAATGAAGCTGGAAGTGTGAAAGCCATAAATTTAACAAGTACTGACTTGAGAGGTACTTTGAAGGATTTCAACTTCTCATCTTTGATCAACCTCTCTGTTCTTGATCTTCATGGCAACGAGTTGTTTGGGAATGTTCCTTCGCGTATAAGTGATCTTTCTAAAATCACTGTTCTCAATCTGGGTTTCAACCAATTCATAGGAAAAATACCTCAAGAAGACCATGATCATGATGGTAGTGTTCTTCTGATTGTCACTCCTATAGTTGGAGCTTCAATACTGCTCAGCATCGTTGCTTGTGTTACTTGTATCTTGTATAAAGGTAGGAGAAAGAAAGGCAATGACTTCAGAGATTGTAACCACAGCAACCTGTTTTCCATTTGGAGCTATGATGGGAAACTTGTTTATGAAGATATCAGGGAAGCTACCGAAGGCTTTGACATGAAGTACTGCATAGGAGTTGGAGGACATGGAATTGTTTATAAAGCTGATCTCTCAACAGGACAGGCAGTTGCTGTAAAGAAGCTTCATTCATGTCAGTACGAGTTCGAGGATCAGAGAACTTTCCAGAGTGAAATATGGACACTCACAAAAATTCGGCATCGAAACATCGTGAAGCTTCACGGACTCGCAGGAACCTACGGTTATATGGCTCCGGAGCTTGCTTACACCACAAAAGTGACAGAAAAGTGCGACGTGTATGGATTTGGGGTGCTGACTCTGGAAGTTATAACAGGATATCATCCTGCGGAACTAGTTTGCTCTCTTTCATATTCATCACTTTCATCATCATCACCATCACCATCATCATCATCATCATCACCATCACCATCATCATCATCATCATCATCTGCGCCACCAATAAATGCCCACAACATGCTGCTGAAAGATCTGTTGGACAAGCGCCTCGCAGATCCAACTCCTGAAGTGGCTGAGGGAATCGTCACCATCATAAAATTAGCATTCACATGCATAGATATCAATCCACTGCGTCGACCTACAATGCAGCAAGTCTCACAAAAGCTATCAACTCAAAAGCAGTCTCTCTCTCATGAATTTCACAGTGTCACATTAGGAAAACTACTAAATGCGCAGATACAAATGTAG 1371 0.4238 MILHPKTMLLKAFLCLSLISSISFFHDHHYASALSGSSSPETNQEEAEALLKWKTSLSNKSQAFLSSWSLSPSHSETPTSPCGWLGITCNEAGSVKAINLTSTDLRGTLKDFNFSSLINLSVLDLHGNELFGNVPSRISDLSKITVLNLGFNQFIGKIPQEDHDHDGSVLLIVTPIVGASILLSIVACVTCILYKGRRKKGNDFRDCNHSNLFSIWSYDGKLVYEDIREATEGFDMKYCIGVGGHGIVYKADLSTGQAVAVKKLHSCQYEFEDQRTFQSEIWTLTKIRHRNIVKLHGLAGTYGYMAPELAYTTKVTEKCDVYGFGVLTLEVITGYHPAELVCSLSYSSLSSSSPSPSSSSSSPSPSSSSSSSAPPINAHNMLLKDLLDKRLADPTPEVAEGIVTIIKLAFTCIDINPLRRPTMQQVSQKLSTQKQSLSHEFHSVTLGKLLNAQIQM 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0556 456 SUPERFAMILY Protein kinase-like (PK-like) 222 428 IPR011009 -
Bisa07g0556 456 PANTHER LEUCINE RICH REPEAT KINASE 2 43 161 - -
Bisa07g0556 456 Gene3D Ribonuclease Inhibitor 42 164 IPR032675 -
Bisa07g0556 456 Gene3D Phosphorylase Kinase; domain 1 198 298 - -
Bisa07g0556 456 ProSitePatterns Protein kinases ATP-binding region signature. 240 263 IPR017441 GO:0005524
Bisa07g0556 456 FunFam Nuclear pore complex protein NUP107 43 163 - -
Bisa07g0556 456 MobiDBLite consensus disorder prediction 353 375 - -
Bisa07g0556 456 SUPERFAMILY L domain-like 58 160 - -
Bisa07g0556 456 ProSiteProfiles Protein kinase domain profile. 234 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0556 456 Pfam Leucine rich repeat N-terminal domain 44 90 IPR013210 -
Bisa07g0556 456 Pfam Protein tyrosine and serine/threonine kinase 238 298 IPR001245 GO:0004672|GO:0006468
Bisa07g0556 456 Pfam Protein tyrosine and serine/threonine kinase 303 430 IPR001245 GO:0004672|GO:0006468
Bisa07g0556 456 Gene3D Transferase(Phosphotransferase) domain 1 299 444 - -
Bisa07g0556 456 FunFam Leucine-rich repeat receptor protein kinase MSP1 197 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0556 Bisa-ChrBisa07 13860926 13864364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0556 95 320 Receptor kinase-like Gene Family AT4G08850 32.000 3.35e-26 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa07g0556 PK_Tyr_Ser-Thr 2.8e-06 CL0016