Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0541 ATGAATCTTTCATCCTTGACCTCGTCATCATCAACCCTAATCAATCCCAACCCACTCATTCCACTCTCAGGCGTTAGACCATCCTTAAGGCCCATGAGGGTTTCTGTAATTTCATGTTCCAGCGCCACCACCACCGTCAATGGCAACAACTTCTACAAGATGCTGTGTCTGAGCCCCGAGAGTGCAACCATGGGGGAGATCAAGCGGGCCTACCGGTCAATGGCTCTGCGGTACCACCCGGACGTGTGCCGGGACGCCTTCATGAAGGAGGAGAGGACGAGGATGTTTGTGGAGCTGAATGCGGCCTACGAGACTCTCTCAAACCCGAGGCTTCGCGAGGAGTACGATTGCGAACTACTGAGTCAGAGAAGTGAGGGATTGAGGATGAAGAAGTGGAAGGAGCAGGTGGTGGAGTTGAGGACGAGGTCTAACAGAAGGATGGGACACAAGGGCAGGTCATGGGGGAGTTGTATGAGAGCTCACAGAATGAAAAACCATAACTAG 504 0.5278 MNLSSLTSSSSTLINPNPLIPLSGVRPSLRPMRVSVISCSSATTTVNGNNFYKMLCLSPESATMGEIKRAYRSMALRYHPDVCRDAFMKEERTRMFVELNAAYETLSNPRLREEYDCELLSQRSEGLRMKKWKEQVVELRTRSNRRMGHKGRSWGSCMRAHRMKNHN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0541 167 PRINTS DnaJ domain signature 91 111 IPR001623 -
Bisa07g0541 167 PRINTS DnaJ domain signature 53 71 IPR001623 -
Bisa07g0541 167 PRINTS DnaJ domain signature 71 86 IPR001623 -
Bisa07g0541 167 Gene3D DnaJ domain 37 142 IPR036869 -
Bisa07g0541 167 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 38 165 - -
Bisa07g0541 167 Pfam DnaJ domain 50 116 IPR001623 -
Bisa07g0541 167 CDD DnaJ 50 108 IPR001623 -
Bisa07g0541 167 SMART dnaj_3 49 111 IPR001623 -
Bisa07g0541 167 SUPERFAMILY Chaperone J-domain 38 119 IPR036869 -
Bisa07g0541 167 ProSitePatterns Nt-dnaJ domain signature. 96 115 IPR018253 -
Bisa07g0541 167 ProSiteProfiles dnaJ domain profile. 50 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0541 Bisa-ChrBisa07 13430955 13431458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0541 52 116 C2H2 Transcription Factor Family AT1G74250 44.776 4.02e-07 47.0