Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0533 ATGCGACAATCATTGGCTCGTCTCGTCTTTCTCTTCCACTGTCAACTGTGCGACGCCTTGCAATTTTTGAAGCTGCGAAACACATCCCCTCTCACTCTCTCTCTCATAACTTCGTTGCCTGCATTTTCACCTGAAACCGTCGATAACCATTGGAGATTACAGCTACAGATTCCGAAGCAAGTATTGAGGAGGAGAAAGAGGGAAGCTCAGACGCTCCTAGAAATTAACTCTGGGAAATCTTCAGAGTTTGCTGCGATTTCGATTTGGTCAACGAAGTCAAGTCATACAGCAGTTTGTCCCCCTTCTCCGGAGGCAAAAGCAGAATATGATGCCTCAACACTGCATTGGCATATTGATGTGGTGGAATTTGTTGAAGTTTTAGGCACTAGGGGAGGCATTCCAATGTCATTGACTACTGTTGATTCTCTGCAAGTCCTTTATGATAACAATCCCCTATTAAAGCAAAAAAATTTTACAACTGGACCAATTTCTCCAACGCCACCTACTCATTCAGGCAACAGTGCTGCTGGAGCTATTGCGGGAGGAGTTGCTGCTGGTGCTGCTCTACTGTTTGCTGCCCCTGCAATTGCACTTGCTTATTGCCGGAGAAGGAAACCCCAGGATTATTTCTTTGATGTTCCTGAAGTGGAAATGATCAACTTGGCTGTCCATCGTAATTTGCTCCGGCTGCTTGGATTTTGCATGACACCAACAGAACGGTTGCTTTTGTATCCTTTCATGGCTAATGGTAGTGTGGCATCATGTTTACAAGAGCGCCCGAAATCACAACCCCCTCTTGAATGGGCTGTACGGAAGCGTATTGCAGTTGGAGCTGCTAGGGGGCTTGCTTATTTACATGATTATTGTGATCCAAAAATCATCCACCGTGATGTCAAGGCTGCAAATATATTGTTGGATGAGGAATTTGAAGCAGTTATTGGAGACTTTGGATTGGCAAAACTTATGGATTACAAACATACTCATGTTACCACTGCTGTATGTGGTACAATTGGCCACATAGCACCAGAGTACCTCTCAACTGGGAGGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTGACGCTTCTTGAACTAATAACTGGACAGAGGGCATATAATCTTGCAAGACTTGCCGTTGATGATGATGTCATGTTACTTGATTGGGTAAAAGGACTTCTGAAAGACAAGAAGTTGGAAATACTAGTTGATGCTGATTTACAGGGTAATTATAATGAAAAGGAGGCAGAGCAACTAATCCAGGTGGCCTTACTGTGCACACAAGGCTCCTCCATGGAAAGGCCAAAGATGTCTGAGGTGGTGAGGATGCTAGAAGGTGATGGTTTGGCTGCAAAGTGGGATCAGTTGCAGAAAGAGGAGATGTTCAGGCAAGATTACAACCAAAACCTTCATCCTAATGCCGACTGGAATGAAGACTCAGCTTCACATATCCTTCCAGATGAGCTCTCAGGTCCAAGATAA 1482 0.4447 MRQSLARLVFLFHCQLCDALQFLKLRNTSPLTLSLITSLPAFSPETVDNHWRLQLQIPKQVLRRRKREAQTLLEINSGKSSEFAAISIWSTKSSHTAVCPPSPEAKAEYDASTLHWHIDVVEFVEVLGTRGGIPMSLTTVDSLQVLYDNNPLLKQKNFTTGPISPTPPTHSGNSAAGAIAGGVAAGAALLFAAPAIALAYCRRRKPQDYFFDVPEVEMINLAVHRNLLRLLGFCMTPTERLLLYPFMANGSVASCLQERPKSQPPLEWAVRKRIAVGAARGLAYLHDYCDPKIIHRDVKAANILLDEEFEAVIGDFGLAKLMDYKHTHVTTAVCGTIGHIAPEYLSTGRSSEKTDVFGYGVTLLELITGQRAYNLARLAVDDDVMLLDWVKGLLKDKKLEILVDADLQGNYNEKEAEQLIQVALLCTQGSSMERPKMSEVVRMLEGDGLAAKWDQLQKEEMFRQDYNQNLHPNADWNEDSASHILPDELSGPR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0533 493 MobiDBLite consensus disorder prediction 471 493 - -
Bisa07g0533 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Bisa07g0533 493 FunFam Somatic embryogenesis receptor-like kinase 1 247 464 - -
Bisa07g0533 493 Gene3D Transferase(Phosphotransferase) domain 1 248 464 - -
Bisa07g0533 493 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 215 454 - -
Bisa07g0533 493 Pfam Protein kinase domain 214 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0533 493 SMART serkin_6 195 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0533 493 Gene3D Phosphorylase Kinase; domain 1 195 247 - -
Bisa07g0533 493 ProSiteProfiles Protein kinase domain profile. 165 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0533 493 SUPERFAMILY Protein kinase-like (PK-like) 213 445 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0533 Bisa-ChrBisa07 13288124 13300622 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0533 215 493 Receptor kinase-like Gene Family AT1G71830 79.928 9.60e-161 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bisa07g0533 Pkinase 9e-33 CL0016