LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa07g0488	ATGAAGGATCTACGTATCATATTGAATGGGTTAAAACCAGTGGTGCTAATGGTGTTGGTGCAGATTGTATATGCAGCGGTGAATATATTGTACGAGCTCGCCATTAACGACGGAATGAGCATGAAGATCGCCACTGCTTATCGCCTTCTCTTCGCTTCTGCTTTCACTCTTCCTCTTGCTCTTGTCCTTGAAAGGAACAAGAGACCGAAGCTGACTTGGAGGGTGCTTTACATGGCATTTCTTTGTGGCTTGTTTGGGGGAAGTTTATTTCAGAACCTTTTCTATGAGGCTCTGGCTTTGACATCGGCAACATTTGTTTCTGCCATCTATAACCTCATTCCAGCCATTACTTTCATCTTGGCCGTATCCTGCGGCATTGAACGATTGAACTTGGGAGCAGCAGGAGGGAAGGCCAAGATGCTAGGAACCATAATAGGGATTGGTGGGGCAATGCTTCTTACCTTCTTCAAAGGTGTCGAAATTGACATTTGGTCCTTCCACTTTAACCTTTTGCAATTGCATCCACATCCTCATGACCAAAACGGCACCGTAGCAACAACACTACATGCTCACTCTGAACACAGATTGCTAGGTGTTCTCTGTGCCACAGCAAGCTGCTTCTCCTTTGCCTTGTGGCTCATTATTCAGGCTAAGATGAGTGCAGAATACCCGAGCCATCTCTCGAGCACAGCTTTGATGTCTACAATGGGAGCCATACAAGCCAGTGCCTTTGCTCTTTGTATTGAGAGAGATTGGAGCCAGTGGAGGTTGGGTTGGGATGTCAGGCTTCTCACGGCCTCTTATTCGGGAATTGTGGCCTCTGGAATAAATGTAATTGTGATAGCATGGTGTATAAGAAAGAGAGGTCCACTATTTGCTTCTGTATTCAACCCTCTAATGCTTGTGCTTGTGGCCATTGCTGCTTCTTTGACTTTGAATGAGAACCTCTATTTAGGAAGTGTGCTCGGAGCGTTGCTGATTGTGTGTGGGCTGTACATGGTGCTATGGGGTAAGAGCAGAGAAATGAGGAAGATAGCTCAGTTAGTTCCATCTGATGAAACTTCCCGACAACTATCTGGTGAAGCAATTGAGGTGGTTGTCGTGTCCACCGTGGCTGACCATGATCCTAACAAAAGCAACCTCGGCCAAACACTATAG	1158	0.462	MKDLRIILNGLKPVVLMVLVQIVYAAVNILYELAINDGMSMKIATAYRLLFASAFTLPLALVLERNKRPKLTWRVLYMAFLCGLFGGSLFQNLFYEALALTSATFVSAIYNLIPAITFILAVSCGIERLNLGAAGGKAKMLGTIIGIGGAMLLTFFKGVEIDIWSFHFNLLQLHPHPHDQNGTVATTLHAHSEHRLLGVLCATASCFSFALWLIIQAKMSAEYPSHLSSTALMSTMGAIQASAFALCIERDWSQWRLGWDVRLLTASYSGIVASGINVIVIAWCIRKRGPLFASVFNPLMLVLVAIAASLTLNENLYLGSVLGALLIVCGLYMVLWGKSREMRKIAQLVPSDETSRQLSGEAIEVVVVSTVADHDPNKSNLGQTL	385

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa07g0488	385	PANTHER	WAT1-RELATED PROTEIN	12	350	IPR030184	GO:0016020\|GO:0022857
	Bisa07g0488	385	Pfam	EamA-like transporter family	197	335	IPR000620	GO:0016020
	Bisa07g0488	385	Pfam	EamA-like transporter family	12	154	IPR000620	GO:0016020
	Bisa07g0488	385	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	47	157	-	-
	Bisa07g0488	385	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	252	340	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa07g0488	Bisa-ChrBisa07	12294304	12298168	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa07g0488	11	357	Nodulin-like Gene Family	AT1G25270	42.363	8.46e-96	288