Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0476 ATGATTACCACCACCTCGTTGTCGTCGTTGCAGTGCTGGAGGGCTAATCGGACTGGGAAAGGGAGGGGCTTGGGGTTGCAGGGCTACAGCAGGCTAAGAATCGCCGAGCATAGCAGTGCGCCGCTAAGAGGGCTTCTCATTCGTGCAGCATCGGCAGCGGGAAAAATGTCTCACAGGAAGTTTGAGCACCCAAGACATGGTTCGCTTGGCTTTCTCCCTAGGAAGCGTGCTGCTCGTCATCGTGGAAAGGTGAAAGCTTTCCCAAAAGATGATCCCAGCAAACCATGCAGATTGACTGCCTTCGTGGGTTACAAGGCTGGGATGACCCACATTGTTAGAGAAGTTGAGAAACCTGGATCAAAGCTGCATAAGAAAGAGACTTGCGAGGCTGTTACCATTATTGAAACTCCTCCAATGGTTGTTGTTGGAGTTGTGGGATATGTGAAGACACCTCGTGGCCTGCGCACACTGAATACAGTTTGGGCTCAGCATCTAAGTGAGGAAGTTAAGAGGCGGTTCTACAAGAACTGGTGCAAGTCTAAAAAGAAGGCATTTATGAAGTATGCAAAGAAATATGAAACTGAGGAAGGAAAGCAGGATATTCAAAAACAACTTGAAAAATTGAAAAAATATGCATCTGTCATCCGTGTTCTGGCACACACTCAGATAAGGAAGCTGAAGGGTCTAAAGCAAAAGAAGGCACATCTGATGGAGATCCAAGTCAATGGTGGGACGGTAGCTCAGAAGGTGGATTATGCGTACAGCTTCTTTGAGAAGCAAATCCCAGTGGATACTGTTTTCCAGAAGGATGAGATGATAGACATCATTGGTGTGACCAAGGGTAAAGGTTATGAAGGTGTCGTAACTCGTTGGGGCGTCACTCGCCTTCCCCGCAAGACCCACAGAGGTCTAAGGAAGGTTGCTTGTATTGGTGCATGGCACCCTGCTCGGGTTTCTTTCACAGTCGCTAGGGCTGGTCAGAATGGGTATCACCACCGTACTGAGTTGAATAAGAAGGTCTACAAGGTTGGCAAAGCAGGGCAAGAGTCGCACACAGCCATCACTGAGTATGACAGGACGGAGAAGGAAATCACTCCTATGGGGGGATTCCCTCATTATGGTGTGGTGAAGGATGACTATATTATGATTAGAGGAGGGTGCATGGGACCCAAAAAGCGGGTGATCACCCTGCGTCAGTCGCTGCTGAAGCAGACGTCTCGTGTGGCCCTTGAAGACATCAAACTCAAGTTCATTGACACTTCTTCCAAATTTGGACATGGTCGCTTCCAGAGCACTCAGGAAAAGCACAAGTTCTATGGTCGCTTGAAGGCCTGA 1335 0.4861 MITTTSLSSLQCWRANRTGKGRGLGLQGYSRLRIAEHSSAPLRGLLIRAASAAGKMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYKNWCKSKKKAFMKYAKKYETEEGKQDIQKQLEKLKKYASVIRVLAHTQIRKLKGLKQKKAHLMEIQVNGGTVAQKVDYAYSFFEKQIPVDTVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKVGKAGQESHTAITEYDRTEKEITPMGGFPHYGVVKDDYIMIRGGCMGPKKRVITLRQSLLKQTSRVALEDIKLKFIDTSSKFGHGRFQSTQEKHKFYGRLKA 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0476 444 FunFam 60S ribosomal protein L3 281 329 - -
Bisa07g0476 444 Gene3D Translation factors 99 440 - -
Bisa07g0476 444 FunFam Ribosomal protein L3 320 444 - -
Bisa07g0476 444 ProSitePatterns Ribosomal protein L3 signature. 267 290 IPR019926 -
Bisa07g0476 444 Gene3D Ribosomal protein L3, domain 3 56 329 IPR044892 -
Bisa07g0476 444 FunFam 60S ribosomal protein L3 138 262 - -
Bisa07g0476 444 SUPERFAMILY Translation proteins 59 425 IPR009000 -
Bisa07g0476 444 FunFam 60S ribosomal protein L3 56 134 - -
Bisa07g0476 444 FunFam 60S ribosomal protein L3 99 198 - -
Bisa07g0476 444 Pfam Ribosomal protein L3 56 425 IPR000597 GO:0003735|GO:0005840|GO:0006412
Bisa07g0476 444 Gene3D - 138 262 - -
Bisa07g0476 444 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 56 439 IPR045077 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0476 Bisa-ChrBisa07 12134566 12142517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0476 56 441 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 85.751 0.0 692