Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0426 ATGGATTTCCAAAAGTTCAAGCAAGTTCATGATCCAAAAACTCCAAGAAACTTTGACTTGAATCTGAAGCCAGAAGCTATAGAAAGTGACGATGAGTTTTTCACTTCACAACTTGATCATATACAAACATCAGAGACTTCTCAGAATCCTACTGATCAGGAAATGAACATAAATTCAAATGGTTTAGCTGTTATTCCAGTTCCTATGACTTTCAACTCTGAAAACAACACAAGTTTAGCACCAGAAATGGTGAATGCCGGAAGCTCCTCAGGTGGTGGCGTGGGACGAAGTTTTTGGCGTCGGCGGGTGGATGGAAACTACAGCGACACATCTCGTCGAGTTTGCACTAATTACAATTGTCGTACCAAAAACACTCCTATGTGGCGCAAGGGACCACTAGGCCCAAAGACACTGTGCAATGCTTGCGGAATTCAGTATAAGAAGCAGATCACCAGCAGAGGAAGCAACCAGTGA 474 0.4304 MDFQKFKQVHDPKTPRNFDLNLKPEAIESDDEFFTSQLDHIQTSETSQNPTDQEMNINSNGLAVIPVPMTFNSENNTSLAPEMVNAGSSSGGGVGRSFWRRRVDGNYSDTSRRVCTNYNCRTKNTPMWRKGPLGPKTLCNACGIQYKKQITSRGSNQ 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0426 157 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 39 149 - -
Bisa07g0426 157 ProSiteProfiles GATA-type zinc finger domain profile. 119 157 IPR000679 GO:0006355|GO:0043565
Bisa07g0426 157 Pfam GATA zinc finger 115 150 IPR000679 GO:0006355|GO:0043565
Bisa07g0426 157 SMART GATA_3 109 156 IPR000679 GO:0006355|GO:0043565
Bisa07g0426 157 Gene3D - 108 157 IPR013088 GO:0006355|GO:0008270
Bisa07g0426 157 CDD ZnF_GATA 114 156 IPR000679 GO:0006355|GO:0043565
Bisa07g0426 157 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 109 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0426 Bisa-ChrBisa07 11243086 11245957 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0426 115 149 C2C2-Gata Transcription Factor Family AT3G20750 71.429 5.40e-15 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa07g0426 GATA 4.2e-15 CL0167