Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0388 ATGTCGTCCCGTTCGGATCGGACCCGAGTGGGGAAGTACGAGCTGGGTCGGACCCTGGGAGAGGGCAATTTCGCTAAGGTAAAGTATGCCCGAAACACAGAGACGGGTGAGGGTGTGGCCATCAAAATTCTTGATAAAGAGAAAATTCTCAAGCACAAAATGATTGGCCAGATAAAACGAGAAATTTCGACAATGAAACTGATTAGACATCCCAACGTTATACGTATGTATGAGGTTATGGCTAGCAAGACAAAGATATACATAGTATTGGAATTTGTGACTGGCGGGGAACTGTTTGATAAAATTGCAAGCAAGGGGAGGTTCAAGGAAGATGAAGCCAGAAAATACTTTCAGCAGCTTATATGTGCTGTGGATTACTGTCACAGTAGAGGTGTTTTCCATAGAGACCTAAAGCCTGAGAATTTGTTGCTGGATGCTAGTGGAGTGCTAAAAGTATCAGATTTTGGCTTGAGTGCACTGCCTCAACAAGTTCGAGAGGATGGGTTGCTTCATACAACATGTGGTACGCCAAATTATGTTGCCCCAGAGGTGATCCATAACAAAGGCTACGATGGAGCGAAGGCAGACCTTTGGTCATGTGGTGTTATTCTTTTTGTTCTAATGGCTGGTTATTTGCCTTTTGAAGAAACCAACCTTATGGCTTTATATAAAAAGATATTCAAAGCTGAGTTCACATGTCCTCCGTGGTTCTCTACAAGTGCAAAGAAACTAATCCAGAGAATCCTTGATCCCAATCCTGCTACTCGGATAACGATTGCTGGGGTCATTGAGAATGAATGGTTTAAGAAGGGATATAAGCCTCCAAGATTTGAGCAGGCCAATGTTAGTCTTGATGACGTAGATGCTATTTTTGGTGAATCATTGGAATCTGAAAATCTTGTTGTAGAGAGGAAAGAAGTAGTGCCTGCAACACCTGTAACTATGAATGCATTTGAACTTATCTCTACGTCTCAAGGCCTCAACCTTAGTAGTCTTTTCGAGAAGCAAATGGGACTTGTTAAAAGGAAAACAAGATTCACATCCAAATGCTCAGCAAATGAGATAATTTCAAAGATTGAAGAAGCTTCAACACCTCTGGGTTTCGATGTCAAGAAGAACAACTATAAGTTGAAGATTCAAGGGGAAAAGACTGGACGTAAAGGTCATCTATCTGTAGTGACTGAGATCTTTGAGGTGGCCCCTTCACTTTACATGGTTGAGCTTCGCAAAGCTGAAGGAGATACTTTAGAATTTCATAAGTTCTACAAGAACCTAGCTACTGGACTGAAAGATGTTGTCTGGAAAGCGGAGCCTATTGATGAAGAAAGCAATGGTGCAAGTTCATCCACTGTTTCACATAACTGA 1365 0.4183 MSSRSDRTRVGKYELGRTLGEGNFAKVKYARNTETGEGVAIKILDKEKILKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASKGRFKEDEARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDASGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGVILFVLMAGYLPFEETNLMALYKKIFKAEFTCPPWFSTSAKKLIQRILDPNPATRITIAGVIENEWFKKGYKPPRFEQANVSLDDVDAIFGESLESENLVVERKEVVPATPVTMNAFELISTSQGLNLSSLFEKQMGLVKRKTRFTSKCSANEIISKIEEASTPLGFDVKKNNYKLKIQGEKTGRKGHLSVVTEIFEVAPSLYMVELRKAEGDTLEFHKFYKNLATGLKDVVWKAEPIDEESNGASSSTVSHN 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0388 454 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 420 - -
Bisa07g0388 454 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Bisa07g0388 454 CDD CIPK_C 316 431 - -
Bisa07g0388 454 FunFam Non-specific serine/threonine protein kinase 6 307 - -
Bisa07g0388 454 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Bisa07g0388 454 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0388 454 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0388 454 FunFam Non-specific serine/threonine protein kinase 309 435 - -
Bisa07g0388 454 SUPERFAMILY Protein kinase-like (PK-like) 10 289 IPR011009 -
Bisa07g0388 454 CDD STKc_SnRK3 12 267 - -
Bisa07g0388 454 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0388 454 Gene3D Kinase associated domain 1, KA1 310 435 - -
Bisa07g0388 454 Gene3D Transferase(Phosphotransferase) domain 1 93 275 - -
Bisa07g0388 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Bisa07g0388 454 Pfam NAF domain 312 372 IPR004041 GO:0007165
Bisa07g0388 454 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Bisa07g0388 454 FunFam Non-specific serine/threonine protein kinase 4 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0388 Bisa-ChrBisa07 10177510 10190179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0388 5 442 CBL-interacting serine-threonine protein kinases AT1G01140 70.721 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa07g0388 Pkinase 4e-74 CL0016