Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0374 ATGGCGAGTTCGTGTTTCCACCCGCTTCGGCTATGGAGGTCGAAGAGGAAACCATTGCCAGTCTCTTCTTCTTCTTCATCCAAGAGGCAGTTAGATTGTGATGCGGAGAACATGGAACGGAAGAGATTTGACAGCTTGGACTCGTGGTCGATGATTTTGGAGTCTGAGAATGTTGAGACATGGGAGGCCTCGAAGGAGGATCAGGAAGAATGGACTGCGGATCTTTCGCAGCTTTTTATCGGAAACAAGTTCGCCTCCGGAGCTCACAGTCGGATTTACCGTGGAATTTACAGGCAGAGAGCGGTGGCTGTGAAAATGGTCAGGATTCCGACCCAGAATGAGGACAAAAGAACTTTACTAGAGCAGCAATTTAAATCCGAAGTGGCTTTGCTTTCGCGTCTCTTTCATCTCAATATAGTGCAGTTTATTGCAGCTTGTAAAAAACCGCCGGTGTACTGTATTATAACAGAATACATGTCACAAGGAACTCTAAGGATGTATCTGAACAAGAAAGAGCCATACTCCCTTTCAATAGAAACTATATTAAGGTTGGCTCTTGACATATCTAGGGGTATGAAGTACCTTCATTCACAAGGTGTGATTCACAGAGACCTAAAGTCAAATAACTTGCTTCTCAATGACGAGATGAGGGTTAAGGTGGCAGATTTTGGCACATCATGTCTTGAAACTCGATGCCGTGAAACCAAAGGAAACATGGGAACGTATCGGTGGATGGCGCCAGAGATGATCAAGGAAAAAGCCTATACTCGAAAAGTTGATGTGTATAGTTTTGGAATTGTGCTTTGGGAACTCACAACTTCATTACTACCCTTCCAAGGAATGACCCCCGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGAATGAGAGGCCTCCGTTGCCGTCTAGCTGTCAGCCGGCGCTTGCACAACTAATAAGGCGGTGCTGGGTAGCAAACCCTTCAAAGCGGCCAGATTTCAGTGACATTGTGTGTACTTTGGAGAAGTATGATGAATGTGTAAAAGAAGGTGTACCTCTTCCTCATTATGCAGCCCTAGTCACCAAAAATGTCATTGTCGAACGATTGAAAGGTTGTGTGCCGTTGAGTTCCTCTATATCCGTACATGCCTAA 1128 0.4539 MASSCFHPLRLWRSKRKPLPVSSSSSSKRQLDCDAENMERKRFDSLDSWSMILESENVETWEASKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYRQRAVAVKMVRIPTQNEDKRTLLEQQFKSEVALLSRLFHLNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMKYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKAYTRKVDVYSFGIVLWELTTSLLPFQGMTPVQAAFAVAEKNERPPLPSSCQPALAQLIRRCWVANPSKRPDFSDIVCTLEKYDECVKEGVPLPHYAALVTKNVIVERLKGCVPLSSSISVHA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0374 375 PRINTS Tyrosine kinase catalytic domain signature 194 212 IPR001245 GO:0004672|GO:0006468
Bisa07g0374 375 PRINTS Tyrosine kinase catalytic domain signature 156 169 IPR001245 GO:0004672|GO:0006468
Bisa07g0374 375 PRINTS Tyrosine kinase catalytic domain signature 259 281 IPR001245 GO:0004672|GO:0006468
Bisa07g0374 375 PRINTS Tyrosine kinase catalytic domain signature 303 325 IPR001245 GO:0004672|GO:0006468
Bisa07g0374 375 PRINTS Tyrosine kinase catalytic domain signature 240 250 IPR001245 GO:0004672|GO:0006468
Bisa07g0374 375 CDD STKc_MAP3K-like 85 329 - -
Bisa07g0374 375 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 71 334 - -
Bisa07g0374 375 SMART serkin_6 78 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0374 375 ProSiteProfiles Protein kinase domain profile. 78 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0374 375 FunFam Serine/threonine-protein kinase isoform 1 68 160 - -
Bisa07g0374 375 SUPERFAMILY Protein kinase-like (PK-like) 54 332 IPR011009 -
Bisa07g0374 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Bisa07g0374 375 Pfam Protein tyrosine and serine/threonine kinase 80 331 IPR001245 GO:0004672|GO:0006468
Bisa07g0374 375 Gene3D Phosphorylase Kinase; domain 1 67 160 - -
Bisa07g0374 375 FunFam serine/threonine-protein kinase HT1 161 354 - -
Bisa07g0374 375 Gene3D Transferase(Phosphotransferase) domain 1 161 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0374 Bisa-ChrBisa07 9799782 9804660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0374 1 365 MAP Kinase Kinase Kinase AT1G62400 81.551 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bisa07g0374 PK_Tyr_Ser-Thr 4.7e-66 CL0016