Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0335 ATGGGTCGGTCTCGTGGGAATTTTCCGGCTGACGAGGACCCAAACCAAAGGTCTAGGAGAAAAAAGAATGCTGCCAGTGGAGAAACTTTGGAATCTGGAGCTGCAGGTCCAGGAACAAGTGAAGGGAAAAAGGCTTTGTACCACTGCAATTATTGTAACAAAGATATTACAGGAAAAATCCGTATCAAGTGCGCCATGTGCCCAGATTTTGACTTATGCATAGAGTGTTTTTCTGTTGGAGCTGAGGTGACTCCACATAAAAGCAATCACCTTTACAGGGTTATGGATAATTTATCTTTCCCTCTAATTTGCCCGGACTGGAATGCAGATGATGAAATTCTGCTTTTAGAGGGAATTGAAATGTATGGCTTGGGGAACTGGGCAGAAGTTGCCGAGCATGTCGGTACAAAGAACAAAGAAGCATGCATAGAACACTATAGGAATGTATACTTGAACTCCCCATTTTTTCCTCTTCCGGACATGTCTCATGTTGTTGGAAAAAACAGAAAAGAGCTTCTTGCTATGGCTAAAGGGCAGGAAGACAAGAAAGCTATTTCTGTTGGGGAGTATGGTGTAAAGGAAGAATCCCCATTTTCTCCATCAAGAGTCAAAGTTGAAGATACCCACAAAGCTGGCCCGCCAAGCCGTTTACTGTCCAGCTTAAATCCAGAAGTAGAATCTAGTGCCTCTGGTGGCACACACACTGCTTCACCTGCTAATCCAAAGGCTTCGAATGCATCCTGGGGCAAAGATGGTCCTGGAGTAATTAAAATGGAAGATAACCGGAATTTTGGGGGAAAAAAGTCAAGTTCCTCGGGCAGTGAAGGTCCTTCTTTAGTAAAGTTGAGTGGTTATAACTCAAAACGACAAGAATTTGATCCTGAATATGATAATGATGCTGAACAACTACTTGCTGAAATGGAATTTAAGGACACTGACACTGAGGATGAACGGGAACTGAAACTTCGTGTGTTGCATATATTTTCAAAAAGGCTTGATGAAAGGAAGCGTAGGAAAGATTTTATACTTGAAAGAAATTTGTTATACCCAAATCCTTTTGAGAAGAATTTAACGCCTGAAGAGAGAGAATTATGTCGGAAATATGATATATTCATGCGTTTTCATAGCAAGGAAGATCACGAGGAATTGCTTAGGACAGTTATATCTGAGCACAGAACTTTAAAAAGAATTCAAGAGCTCAAGGAAGCCCAAGCCGCAGGTTGCCGCACATCAACCGAAGCAGATAGGTATCTGGAACATAAGCGTAGGAGGGAAGCCGAAGAGAATGCACACAGGGCAAATGATAGTGCTCAGGGTGGCCAAAGCAATCAGGGCGGTCCAAATGCTTTCATGTCTTCAGACTTCACCGGCAAGGATCCAACTGGAAGACCTGCAGGACCGGCTGCATCAAGCTCTGTCAATGAAATGGACGTTGCAGGATATTACGGAGCAGATTTACTTTCTGAAAGTGAAAAACGTTTGTGCTGTGAGCTGAGGTTGCCTCCAGTGACATATCTGCAGATGCAACAGGTTTTGTCCGTACAAATACTGAGTGGGAATATCACTGCAAAATCAGATGCTCATCACTTATTCAGAATGGAAGCAACCAAAGTCGACAGAGTCTATGACATGCTCGTCAAGAAGGGAATTGCTCCACCATGA 1662 0.432 MGRSRGNFPADEDPNQRSRRKKNAASGETLESGAAGPGTSEGKKALYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHLYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWAEVAEHVGTKNKEACIEHYRNVYLNSPFFPLPDMSHVVGKNRKELLAMAKGQEDKKAISVGEYGVKEESPFSPSRVKVEDTHKAGPPSRLLSSLNPEVESSASGGTHTASPANPKASNASWGKDGPGVIKMEDNRNFGGKKSSSSGSEGPSLVKLSGYNSKRQEFDPEYDNDAEQLLAEMEFKDTDTEDERELKLRVLHIFSKRLDERKRRKDFILERNLLYPNPFEKNLTPEERELCRKYDIFMRFHSKEDHEELLRTVISEHRTLKRIQELKEAQAAGCRTSTEADRYLEHKRRREAEENAHRANDSAQGGQSNQGGPNAFMSSDFTGKDPTGRPAGPAASSSVNEMDVAGYYGADLLSESEKRLCCELRLPPVTYLQMQQVLSVQILSGNITAKSDAHHLFRMEATKVDRVYDMLVKKGIAPP 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0335 553 FunFam Transcriptional adapter 2 468 552 - -
Bisa07g0335 553 MobiDBLite consensus disorder prediction 10 26 - -
Bisa07g0335 553 Pfam Myb-like DNA-binding domain 106 149 IPR001005 -
Bisa07g0335 553 ProSiteProfiles Zinc finger ZZ-type profile. 44 100 IPR000433 GO:0008270
Bisa07g0335 553 Pfam Zinc finger, ZZ type 45 87 IPR000433 GO:0008270
Bisa07g0335 553 Gene3D - 468 551 IPR036388 -
Bisa07g0335 553 MobiDBLite consensus disorder prediction 434 455 - -
Bisa07g0335 553 Gene3D - 101 152 - -
Bisa07g0335 553 Gene3D - 39 94 IPR043145 -
Bisa07g0335 553 PIRSF Txn_adaptor_ADA2 34 552 IPR016827 GO:0003713|GO:0006357|GO:0035065
Bisa07g0335 553 ProSitePatterns Zinc finger ZZ-type signature. 49 76 IPR000433 GO:0008270
Bisa07g0335 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 154 IPR017930 -
Bisa07g0335 553 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 47 548 - -
Bisa07g0335 553 SUPERFAMILY RING/U-box 47 109 - -
Bisa07g0335 553 ProSiteProfiles Myb-like domain profile. 107 150 IPR001005 -
Bisa07g0335 553 ProSiteProfiles SANT domain profile. 102 154 IPR017884 -
Bisa07g0335 553 SUPERFAMILY Homeodomain-like 100 153 IPR009057 -
Bisa07g0335 553 MobiDBLite consensus disorder prediction 194 292 - -
Bisa07g0335 553 SUPERFAMILY Homeodomain-like 460 550 IPR009057 -
Bisa07g0335 553 FunFam Transcriptional adapter 40 95 - -
Bisa07g0335 553 ProSiteProfiles SWIRM domain profile. 467 553 IPR007526 GO:0005515
Bisa07g0335 553 MobiDBLite consensus disorder prediction 424 471 - -
Bisa07g0335 553 CDD SANT 107 149 IPR001005 -
Bisa07g0335 553 MobiDBLite consensus disorder prediction 220 244 - -
Bisa07g0335 553 SMART zz_5 43 88 IPR000433 GO:0008270
Bisa07g0335 553 SMART sant 103 152 IPR001005 -
Bisa07g0335 553 MobiDBLite consensus disorder prediction 265 285 - -
Bisa07g0335 553 FunFam Transcriptional adapter 2 100 152 - -
Bisa07g0335 553 CDD ZZ_ADA2 47 95 IPR041983 -
Bisa07g0335 553 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0335 Bisa-ChrBisa07 8870399 8876572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0335 1 550 EF-hand Containing Proteins AT3G07740 47.213 1.73e-162 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa07g0335 Myb_DNA-binding 2.8e-11 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g0335 07 8870399 8876572 Bisa07g0335 07 8870399 8876572 ECH