Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0332 ATGACATCCATTCCGTGGAAAAACATATGGATTAGACGGCAGCAATGCCCATGTGGAGATTGGAAATGTTACATAACATATGAGGGTGATGCCGAGGAGACTTCAGCAGGACCAAAATTGGTAAAGAAAGAAAAAGCATCATCAGAAGTTCTGATTTTACCTTATGTTGGAATGGTGTTTAAGAGTGATGATGATGCATTTGAGTACTATGGGAATTTCGCCAGGAAGAACGGGTTCTCAATTCGGAAAGAAAGATCAAGACATAGCCCACAGTTGGGCATTTATAAACGCGACTTTGTTTGCTACCGATCTGGGTTTGCCCCGTTGAAGAAAAAGTCTGATGGAGAACACCATAGAGATAGGAAATCGGTGCGGTGTGGATGCGATGCAAAAATGTATCTGTCTAAGGAGATAGTAGAGGGAGTTTCCCAATGGTTTGTTGTGCAGTTTAGTAATATACATAATCATGAACTTTTAGAAGATGACCAGGTGCGGCTTCTTCCGGCGTATCGTAAAATTCAAGAGGATGATCAAGAGTGTATAATCTTACTTTCTAAAGCTGGGTTTCCAGTACATCGGATAGTAAAGATGCTGGAGCTGGAAAAAGGGATTCAAGGTGGGCAACTGCCTTTCTTGGAAAGGGATGTGAGGAATTTTGTTCAAAACCGGAAGAAGGTTATTGAAGATAATGAGGCATCGCTAAGTGAGAAACGAGAAAATGATACATTGGAACTTCTTGAGGCATGCAAAGCCATGAAACAGACAGATGATGACTTTGTTTATGATTTTACAGTGGATGAGAATGAAAAGGTTGAAAATATTGCCTGGGCATATGGTGATTCCGTTCATGCATATGATATGTTTGGTGATGTGGTTTCTTTTGATACTACTTATCGATCAATCACATATGGGTTACTCTTTGGAGCATGGTTTGGTATTGACAACTATGGTAGAACCGTTTTCTTTGGTTGTGTTTTATTGCAGGATGAAACGCCCCAATCGTTCTCATGGGCATTACAGACTTTTGTCCGACTCATGAGAGGAAGATGTCCCCAAACAATATTAACCAATGTTGACCCTGGGATTAGAGATGCCATAAGGAGTGAATTGCCAGGCACTAAACATGTGATTTCTATATGGACTATAATGCCCAAGGTACCCGGTTGGTTTTGTCTTCCTCTTGGATCTCGCTATGAAGAATTTAAATCTGAGTTTGAGGCATTATGTCAAATTGAGAATACAGAGGAATTTGAACTTCGATGGAACCAAATGACATCCGCATTTGATCTTGGTTCAGATAAGCATATAGGTCTACTGTATTCTATGCGGGAATGTTGGGCACTGTCCTATGTGAGAGGTTTCTTTCTGGCTCGGATGGCAACAACAGCTTACTCAAAGGCTATAGATGGATTTTTGAAAGGGATTTTCAGTGCAGAAACATGTTTGCGTAGCTTTTTCGAGCAGGTTGGTAGTTGTGTAAGTTTTCATCGTCACATGCGTCACGAGGCTCAATATATACATCTTAAAAGCTGCATACCCATTGAAGAGCATGCACGGAGTATTTACACACCTTTTGCTTTTAATGCCTTGCAACAAGAATTAATGCTGGCAATGCAATATGCTACATCTGAAATGGCCAATGGATCGTACATCGTACGCCACTTTAAAAGGATGGATGGTGAACATCTTGTGATATGGCTAGCTGAAGATGAACAGATCCATTGCTCCTGCAAGGAATTTGAATCGTCGGGGATATTATGCCGACACGCTCTTCGTGTATTTGTAATAAAGAATTACTTTCAGCTGCCCGACAAGTATTATGTAAGTAGGTGGCGAAGGGAGTCCTCTTTGCTTCTTGACAATGATCATACTAGTAATCACAGTCTTGACCATGAATGGTTTCAAGAATATCAGTCCCTTGCCGAAACTTTGTTTGCAGAATCATCGGTTACAAAGGAGCGATCTGACTATGTTCGTGGGGAACTGACAAGAGAAATTCATAGGATTCTTAGCGAGGTTAGAAATCTGCCAGAGACCGATGGAGTCACCATGGACTTGACTGTATCACCCAACAGTTAG 2079 0.4117 MTSIPWKNIWIRRQQCPCGDWKCYITYEGDAEETSAGPKLVKKEKASSEVLILPYVGMVFKSDDDAFEYYGNFARKNGFSIRKERSRHSPQLGIYKRDFVCYRSGFAPLKKKSDGEHHRDRKSVRCGCDAKMYLSKEIVEGVSQWFVVQFSNIHNHELLEDDQVRLLPAYRKIQEDDQECIILLSKAGFPVHRIVKMLELEKGIQGGQLPFLERDVRNFVQNRKKVIEDNEASLSEKRENDTLELLEACKAMKQTDDDFVYDFTVDENEKVENIAWAYGDSVHAYDMFGDVVSFDTTYRSITYGLLFGAWFGIDNYGRTVFFGCVLLQDETPQSFSWALQTFVRLMRGRCPQTILTNVDPGIRDAIRSELPGTKHVISIWTIMPKVPGWFCLPLGSRYEEFKSEFEALCQIENTEEFELRWNQMTSAFDLGSDKHIGLLYSMRECWALSYVRGFFLARMATTAYSKAIDGFLKGIFSAETCLRSFFEQVGSCVSFHRHMRHEAQYIHLKSCIPIEEHARSIYTPFAFNALQQELMLAMQYATSEMANGSYIVRHFKRMDGEHLVIWLAEDEQIHCSCKEFESSGILCRHALRVFVIKNYFQLPDKYYVSRWRRESSLLLDNDHTSNHSLDHEWFQEYQSLAETLFAESSVTKERSDYVRGELTREIHRILSEVRNLPETDGVTMDLTVSPNS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0332 692 SMART 26again6 573 600 IPR006564 GO:0008270
Bisa07g0332 692 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Bisa07g0332 692 Pfam MULE transposase domain 291 383 IPR018289 -
Bisa07g0332 692 ProSiteProfiles Zinc finger SWIM-type profile. 563 598 IPR007527 GO:0008270
Bisa07g0332 692 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 52 644 IPR031052 GO:0006355
Bisa07g0332 692 Pfam SWIM zinc finger 570 594 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0332 Bisa-ChrBisa07 8798535 8801209 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bisa07g0332 MULE 5.6e-16 CL0219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g0332 07 8798535 8801209 Bisa07g0332 07 8798535 8801209 ECH