Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0316 ATGGCTGAGTCAGACAACGATTCCGGAGGTCAAACGGGGAACACAGGCGATCTGTCATCGGGTTGCAGAGAGCAGGACCGGTACCTGCCGATAGCGAACGTGAGCCGAATCATGAAGAAGGCGTTACCGGCGAACGCCAAGATCTCGAAGGAGGCCAAGGAGACGGTGCAGGAGTGCGTGTCGGAGTTCATCAGCTTCATCACCGGCGAGGCCTCTGAAAAGTGCCAGAAGGAGAAGCGCAAGACCATCAACGGCGACGACCTCCTCTGGGCCATGACCACCCTCGGCTTCGAGGACTACGTCGACCCCCTCAAGCTCTACCTCCACAAGTACAGGGAGATGGAGGGCGAGAAGACCGCTATGCTCGGCAGGCAGCCAACCGGCGCCGATCACCGGGACGGGAATGGCGGAGCCAGTAGTGGTGGCGGTTATGGCGGAGCGGTGATGATGATGGGGCATCATCATCGTCATCAAGGCCACATGTATGGATCTGGAGGTGGAGCAGCGTGA 510 0.5961 MAESDNDSGGQTGNTGDLSSGCREQDRYLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASEKCQKEKRKTINGDDLLWAMTTLGFEDYVDPLKLYLHKYREMEGEKTAMLGRQPTGADHRDGNGGASSGGGYGGAVMMMGHHHRHQGHMYGSGGGAA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0316 169 Gene3D Histone, subunit A 17 135 IPR009072 GO:0046982
Bisa07g0316 169 MobiDBLite consensus disorder prediction 1 21 - -
Bisa07g0316 169 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 28 92 IPR003958 -
Bisa07g0316 169 PRINTS CCAAT-binding transcription factor subunit A signature 56 74 - -
Bisa07g0316 169 PRINTS CCAAT-binding transcription factor subunit A signature 75 93 - -
Bisa07g0316 169 PRINTS CCAAT-binding transcription factor subunit A signature 94 112 - -
Bisa07g0316 169 ProSitePatterns NF-YB/HAP3 subunit signature. 59 75 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bisa07g0316 169 FunFam Nuclear transcription factor Y subunit B-3 17 140 - -
Bisa07g0316 169 SUPERFAMILY Histone-fold 25 126 IPR009072 GO:0046982
Bisa07g0316 169 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 7 134 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bisa07g0316 169 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0316 Bisa-ChrBisa07 8304953 8305462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0316 1 125 CCAAT-HAP3 Transcription Factor Family AT4G14540 82.400 3.65e-71 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa07g0316 CBFD_NFYB_HMF 8.3e-28 CL0012