Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0314 ATGGACGTCTTCGCCGGCGACGACTTCCCTGACCACGTGGCGTCATTTCCGGAGACCGGTGACTTCCTTTGCGCTCAGTCAATGCCTCTGATTCAGCCCCCGGATATCATCGCCGACCGCCTGCAGAACCCTCGGCCGCCGCCGCAGAAGCTCCGCCCCATCAGGTGCAACGGCAGGTTGTCGCCGGTCACATCCCCTCATGTGGGTTTCCTCAGTAATCAGCTGTGTGTGGATAATGGAGAGTCGAGTCAGAACCTTCAGTCTCTGAGGCAGCAAGTGGAAGCTAAGGAGGCGATAGGAGATGATTTAATGGATAATCCGGCGGATGCTGGGTCGGGTCACTCCGCACATAATTGGGACCCGAACGATGAGGGATGCTTGTTGGAGCAGGAATCTGTCTCATCTTTGGATGCTGATGACAATTCATCTGAAAGTACAAAAGAACCTGGGAGTGGAAAGAGAACGAAAAAGACTATGAAAATGCTTGAATTTTTTCTAGAAAATTTGGTAAATAAAGTGATGGAAAAGCAAGAGCAGATGCATAAACAATTAGTGGATTTGATAGAAAAGAAGGAAAGGGAAAGAGTGATGAGGGAAGAAGCTTGGAAGCAGAAGGAAATAGAAAGAATTAAAAGAGATGAGGAGGCCAGACTCCAAGAAAAATCTCGGAATTTAGCCCTCATATTGTTTATTCAGAATTTTCTGGGACATGAAATTCAAATCCCCCAACCAGCAGTAGGCAGCTTAAGAGCAGAGGATGAAGGTGAGGCCAACATCCAAAGAGATTTTAAGAGCGATTTAAGTAACAATCGATGGCCAGAAGCTGAAGTACAATCCCTCATAACTTTAAGAACTTCATTAGAACACAAGTTTCGTCTTATGGGATACAAAGGATCTATTTGGGAGGAGATATCTGAGGCAATGCATAATATGGGCTACAACCGTTCTGCAAAGAAGTGTAAGGAGAAGTGGGAGAACATCAATAAGTACTATAAAAGGACAATAGGAAGTGGGAAGAAGCAACGCCTAAACAGTAAAACTTGCCCTTACTTTGATGAGCTGGACGTTCTGTACAGAAATGGACTCTTGAATGTTGGAAATACCCTAAGCACTACCATCGATGTTGCCAAGATGGAGGAGGAGCAAATTTCACTGGCTGACACTTCTGGCTTGCAGTCTGTGGATATAGTGGATCTGGAAATTGAAAGGTTTGATATCCCCTCCCTGGGTTTTCGGGTCAGAAAAGGAAAAGAATCTGCTGAGAAAATTGCAGTTTGA 1278 0.4538 MDVFAGDDFPDHVASFPETGDFLCAQSMPLIQPPDIIADRLQNPRPPPQKLRPIRCNGRLSPVTSPHVGFLSNQLCVDNGESSQNLQSLRQQVEAKEAIGDDLMDNPADAGSGHSAHNWDPNDEGCLLEQESVSSLDADDNSSESTKEPGSGKRTKKTMKMLEFFLENLVNKVMEKQEQMHKQLVDLIEKKERERVMREEAWKQKEIERIKRDEEARLQEKSRNLALILFIQNFLGHEIQIPQPAVGSLRAEDEGEANIQRDFKSDLSNNRWPEAEVQSLITLRTSLEHKFRLMGYKGSIWEEISEAMHNMGYNRSAKKCKEKWENINKYYKRTIGSGKKQRLNSKTCPYFDELDVLYRNGLLNVGNTLSTTIDVAKMEEEQISLADTSGLQSVDIVDLEIERFDIPSLGFRVRKGKESAEKIAV 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0314 425 PANTHER FI21293P1 91 370 - -
Bisa07g0314 425 Pfam Myb/SANT-like DNA-binding domain 270 356 IPR044822 -
Bisa07g0314 425 CDD GT1 270 334 - -
Bisa07g0314 425 Coils Coil 174 194 - -
Bisa07g0314 425 Coils Coil 204 224 - -
Bisa07g0314 425 Gene3D - 272 333 - -
Bisa07g0314 425 Coils Coil 86 106 - -
Bisa07g0314 425 MobiDBLite consensus disorder prediction 141 155 - -
Bisa07g0314 425 ProSiteProfiles Myb-like domain profile. 264 328 IPR001005 -
Bisa07g0314 425 MobiDBLite consensus disorder prediction 102 155 - -
Bisa07g0314 425 FunFam Trihelix transcription factor GT-2 272 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0314 Bisa-ChrBisa07 8270604 8274418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0314 5 360 Trihelix Transcription Factor Family AT5G47660 36.432 8.43e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa07g0314 Myb_DNA-bind_4 3.2e-21 CL0123