Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0309 ATGGAACGTGCAGGCTTTCATGGCTACCGCAAGCTTCCCAACACTCCCTCTTCGGGGTTGAAGCTATCTTCGGTATCGGAGACGACGATCAACCACTCCTCCGGAGGAGGAGCCGGAGGGGGAGAGGACAACGAGTGCACGGTGAGGGAGCAAGACAGGTTCATGCCGATCGCGAACGTGATACGGATAATGCGAAAGATCTTACCTCCGCACGCGAAGATCTCCGACGATGCGAAGGAGACCATCCAGGAGTGCGTGTCGGAGTACATCAGCTTCATCACCGGCGAGGCCAACGAGCGGTGCCAGCGGGAGCAGCGCAAGACGATCACCGCAGAGGACGTCCTCTGGGCGATGAGCAAGCTCGGCTTCGACGACTACATCGAGCCCCTCACAATGTACCTCCACCGCTACCGCGAGATGGAGGGTGATCGAGCCTCCATGCGCGGCGAGCCCCTCGGGAAACGGGCCGTCGACTCGCCGTACGCCGCTCAAGGGCTGGGGCCGTTCGTGCCGCCGCCGTTCCACATTGGATATCCGAATGGGTACTTCGGCCCGGCGGCGGCCATGGGAGGGTACATGAGGGAGCACGCACCGAGTAATAATGCAGGAGGAGGAGGAACGACGTCGTCGCACTCACAGGCGGAACCTAATGGGCAATATAAGTGA 666 0.6096 MERAGFHGYRKLPNTPSSGLKLSSVSETTINHSSGGGAGGGEDNECTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYREMEGDRASMRGEPLGKRAVDSPYAAQGLGPFVPPPFHIGYPNGYFGPAAAMGGYMREHAPSNNAGGGGTTSSHSQAEPNGQYK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0309 221 MobiDBLite consensus disorder prediction 196 221 - -
Bisa07g0309 221 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 54 118 IPR003958 -
Bisa07g0309 221 PRINTS CCAAT-binding transcription factor subunit A signature 120 138 - -
Bisa07g0309 221 PRINTS CCAAT-binding transcription factor subunit A signature 82 100 - -
Bisa07g0309 221 PRINTS CCAAT-binding transcription factor subunit A signature 101 119 - -
Bisa07g0309 221 ProSitePatterns NF-YB/HAP3 subunit signature. 85 101 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bisa07g0309 221 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 38 195 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bisa07g0309 221 MobiDBLite consensus disorder prediction 201 221 - -
Bisa07g0309 221 MobiDBLite consensus disorder prediction 1 45 - -
Bisa07g0309 221 FunFam Nuclear transcription factor Y subunit B-6 43 159 - -
Bisa07g0309 221 SUPERFAMILY Histone-fold 51 149 IPR009072 GO:0046982
Bisa07g0309 221 Gene3D Histone, subunit A 42 159 IPR009072 GO:0046982
Bisa07g0309 221 MobiDBLite consensus disorder prediction 16 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0309 Bisa-ChrBisa07 8104314 8106851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0309 1 144 CCAAT-HAP3 Transcription Factor Family AT5G47670 74.675 1.03e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa07g0309 CBFD_NFYB_HMF 6.2e-26 CL0012