Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0287 ATGGACAATTATCATCAGGGCGATTTAACTGACATATTCCGTGCAACTCTCGCTGGCGTCACTTCTTCTTCTTCTTCAACCTCTGATCAATTACCCGCTCCTCCTGATCTCTCTTCCTCCCACACGTGGCACCACCACAATCATCATCACTTCTCTTTCTCCGATGCCACGGCAAACGACGTCGTTGTGGATCCCCGAGGTAACCCCTTCGGCGATCCCTTCTCCAACATGCGAGATCCCTTCCTACACGACCTCGATTTATCTGCAGTCAATTCTTCTTCTTATTTCAGTGCAAATAATGCCACTAATAATTCTGCCATAGAGGAAGTAACTGCTTTTCCGGGTTCTTCGGCGGTTTTGGGGCAGAATCTTCTAGAGGATCATGACATGAGAATAATTAGGCCTCCTGTTGCTGCCGCTGCTGCTGGTGGTTGTAACGGCAGTAACAGCATGTTCTCGAGCATGATTCAGATCTCTCCCGGTAATATTAACGCGGTTTCGCCGCCGTGCGATTCGATGTCACCGGTAAACGTGTCAGCGTCACCGAGGGGAATTAGGCCGCCGGCGCCAGCTTCTTCTGCTGTGGTTTCAGGCAACATGGTGGACAACGCAGGAGGAGTGCAGATCTCGTCTCCAAGGAATCCGGGTCTTAAGCGAAGAAAGAGCCAGGCAAAGAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAACAGCAGACCAAGCAGCGGAGAGGTAGTTCCGTCTGATTTGTGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGTTCTCCTTATCCAAGGGGTTATTATAGATGCAGCAGCTCGAAGGGTTGTTCTGCGAGGAAACAAGTGGAGAGGAGCAGGACAGATCCAAACATGTTGGTTATTACTTACACTTCAGAGCACAATCACCCTTGGCCTACTCAGAGAAATGCTCTTGCTGGCTCAACTAGGTCTCAACCATCCAAGAATAACAATAATAACAGTAATAGCAACAACCACAATGCTGCTGCTTCGAAGGATAACAATGCTGAAGCAGCCTTCATTCAGCCTCGAAACGGCATGTCGTTGAGGCCAAAGGAGGAGGAGGAAGAGCAGCAGCAAACAGATCAGAGCAACAGCGACGTGGTGAGCAATAGAGTGAAGGAGGAGATGGAGATTACGGAAGATGCAGAGAAGCATATTGATGAGCTTGAAATTGAGAATAATAATAATAATTTGGAAGACAATAACAATATGAATAATGGAGAATTCAGTGATGGATCAGTACTGGGTTACAAGCCATCCTTGTGTGAGGATTTCTTTGCAGAATTGGGAGAGATTGAAGCTGACCCACTAAATCTCTTGTTCACTCAAGGCTTCAATGAGCAGCAACAACAGCAGAGAGAATCCAAGGCCTTAGATCCTTTTCATCTCGTTGACTGGTCATCATCATCAGGAGATCACAACACCACCACCACCTCATTTGAAGAACCAAAGAGAGGGTTATAA 1494 0.4746 MDNYHQGDLTDIFRATLAGVTSSSSSTSDQLPAPPDLSSSHTWHHHNHHHFSFSDATANDVVVDPRGNPFGDPFSNMRDPFLHDLDLSAVNSSSYFSANNATNNSAIEEVTAFPGSSAVLGQNLLEDHDMRIIRPPVAAAAAGGCNGSNSMFSSMIQISPGNINAVSPPCDSMSPVNVSASPRGIRPPAPASSAVVSGNMVDNAGGVQISSPRNPGLKRRKSQAKKVVCIPAPAAANSRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNNSNSNNHNAAASKDNNAEAAFIQPRNGMSLRPKEEEEEQQQTDQSNSDVVSNRVKEEMEITEDAEKHIDELEIENNNNNLEDNNNMNNGEFSDGSVLGYKPSLCEDFFAELGEIEADPLNLLFTQGFNEQQQQQRESKALDPFHLVDWSSSSGDHNTTTTSFEEPKRGL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0287 497 Coils Coil 382 409 - -
Bisa07g0287 497 Gene3D WRKY domain 220 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa07g0287 497 SUPERFAMILY WRKY DNA-binding domain 245 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa07g0287 497 MobiDBLite consensus disorder prediction 264 343 - -
Bisa07g0287 497 MobiDBLite consensus disorder prediction 477 497 - -
Bisa07g0287 497 MobiDBLite consensus disorder prediction 473 497 - -
Bisa07g0287 497 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 453 IPR044810 GO:0003700
Bisa07g0287 497 ProSiteProfiles WRKY domain profile. 242 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa07g0287 497 MobiDBLite consensus disorder prediction 196 210 - -
Bisa07g0287 497 MobiDBLite consensus disorder prediction 291 341 - -
Bisa07g0287 497 MobiDBLite consensus disorder prediction 23 44 - -
Bisa07g0287 497 SMART WRKY_cls 247 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa07g0287 497 Pfam WRKY DNA -binding domain 249 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa07g0287 497 MobiDBLite consensus disorder prediction 23 37 - -
Bisa07g0287 497 FunFam probable WRKY transcription factor 14 220 301 - -
Bisa07g0287 497 MobiDBLite consensus disorder prediction 359 381 - -
Bisa07g0287 497 MobiDBLite consensus disorder prediction 174 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0287 Bisa-ChrBisa07 7497906 7500507 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0287 1 454 WRKY Transcription Factor Family AT1G30650 40.938 3.68e-80 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa07g0287 WRKY 2.9e-25 CL0274