Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0235 ATGCATGATATTGAAATGGATTTTGTAGGAGAAAAGCGAGTCCTAGATTCAGAACTTTGGCATGCGTGTGCCGGCCCTCTTGTTTCTTTACCACCAGTTGGAAGCCGCGTTGTGTACTTTCCACAAGGTCTCAGTGAACAGGTTGCTGCGTCGACCAACAAGGAAGTGGATGCTCATATACCTAACCCTAGCTTACCTCCACAGCTTATTTGTCAGCTTCATAATGTGACTATGCACGCTGATGCTGAGACAGATGAAGTGTACGCACAGATGACCTTGCAAGCTCTAAATCCTCAAGAGCAGAAAGAGGCTTACCCTCTGGCAGAGTTGGGCACTCCAAGTAAACAGCCGACAAATTATTTTTGCAAAACTTTGACAGCCAGTGACACGAGTACACATGGGGGATTCTCTGTTCCACGCAGAGCAGCCGAGAAAGTTTTTCCTCCACTGGACTTCTCCCAACAACCTCCTTGTCAAGAGTTAATTGCAAGGGATCTGCATGGCAATGAATGGAAATTCAGACATATCTTTCGGGGTCAACCCAAAAGGCATCTTCTCACAACAGGATGGAGTGTTTTTGTGAGTGCTAAAAGGCTTGTTGCTGGTGATTCAGTTCTGTTTATCTGGAATGAAAAGAACCAATTGCTTATTGGTATCCGGCGGGCAAATCGACCCCGAACTGTGATGCCTTCATCAGTGTTATCTAGTGATAGTATGCAATTGGGACTTCTTGCTGCTGCAGCTCATGCAGCTGCTACAAACAGTCGTTTCACAATTTTCTTTAACCCACGCGCTAGCCCATCTGAATTTGTCATACCCTTAGCCAAGTATGTTAAAGCTGTATATCATCCCCGAGTCTCGGTTGGCATGCGTTTCAGGATGCTGTTTGAGACTGAGGAATCAAGTGTGCGGCGATACATGGGCACAATAACTGGTATTAGTGACCTGGATCCTGTTCAGTGGCCAAATTCTCATTGGCGCTCAGTCACGGTTGGCTGGGATGAATCCACAGGAGGACAGAGGCAACCTAGGGTTTCGCTATGGGAAATTGAGCCATTAACAACATTTCCGATGTATCCATCATCATTTCCTCTCAGGCTTAAACGACCATGGCCTCCAGGACTGCCTTCTTTCCAGGGCTTGAAGGATGACAATTTAACTATAAGTAATCAGCTATTGTGGCTCCGAGATACTGCAGACAGAGGGCTTCAGTCTCTCAGTTTCCAAGGGTTTGGGGTTAGTCCTTGGATGCAGCCAAGGCTCGATACCTCCATGTTGAATTCACCAACCAACATGTACCAAGCTATGGCTACGACTGCAGTTCAGGATATGAGGACTTTGGATCCCTCCAAACAGCACGCTACATCCTTTTTTCAATTTCAGCAACCGCAAAACTTCCCACAAAGAACTGCCGCTTTAATGCAGGCCCAGATATTGCAGCAATCTCAACCTCAGCAGGCTTTTCAAAGTAATCAAGAGAATCAGCATCTATCTCAATCTATGGCTTCAACTCAAACTCAACTTCAGCAGCAGCAGCAGCAAGTGGTTGATCATCAGCAGATTTCAAGTGCTTCTGCTATGTCTCAGTTTGTTTCAACACTGCAACCCCATTCACCACCCACGCAAGCTCAATCTTCACTATGCCAACGGCAAAACTTTTCTGATTCAAATGTAATTCCTGTGACTGGTGCTTCTGTTTCTCCCTTGCATGGTTTCTTGGGTTCATTTTCCCAGGACGAATCGTTCCACCTTCTCAACCTACCTAGAACTAGCTCTTGGGTTCCTGTTCAACCATCTACTGCCTGGCCCTCAAAGGGTGTCGCAGTGGATCCTCTACTTTCTTCTGGAGCCTCTCAGTGTATTCTGCCTCAGTTGGAGCAGTCAGGGCAGCTACAGGGTATGATGTCTCAGAATGTAGTTTCGTTGCCACCCTTTCCTGGTAGGGAGTGTGCAGTAGACCAAGGGAGCACTGATCCACAGAATAATCTTTTATTTGGTGTTAATATAGAGCCCTCATCTCTTATAGTGCAGAATGGGATGTCGAGCCTTAAGGGAGTCGGCAGCAACAGTGACTCCACGCCTGGGCATTTTCAATTATCTAATTACCTGATTACTACAGGAACTGATTCTTCATTGAATCAGGGCATGTCACCAAGCATTGTTGAATCGGATTTCCTTGAGACTTCAGATAATGCAGGTCAAGGAAACCTAACAAATAAAACCTTTGTGAAGGTTTACAAGTCAGGGTCCTTGGGAAGATCGTTGGATATCACTAAATTCGGTAGCTACCTTGAGCTGCGTAGTGAACTTGCCTGTATGTTTGGCCTTGAAGGCAAGTTGGAGGACCCTCTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGATGTTCTTCTCCTCGGTGATGGCCCCTGGCCGGAATTCGTAAATAGTGTATCATGTATCAAGATACTTTCCCCCCAAGAAGTGCAGCAAATGGGCAACAATGGGCTTGAGCTTCTGAACTCGGTCCCAATTCAGAGGCTCTCTAATGGCATCTGCGATGATCACATTAGCCGTCAGGACCCAAGAAATTTAAGCACCGGGATAACAACCGTGGGGTCTCTCGACTACTGA 2622 0.4645 MHDIEMDFVGEKRVLDSELWHACAGPLVSLPPVGSRVVYFPQGLSEQVAASTNKEVDAHIPNPSLPPQLICQLHNVTMHADAETDEVYAQMTLQALNPQEQKEAYPLAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLIGIRRANRPRTVMPSSVLSSDSMQLGLLAAAAHAAATNSRFTIFFNPRASPSEFVIPLAKYVKAVYHPRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVQWPNSHWRSVTVGWDESTGGQRQPRVSLWEIEPLTTFPMYPSSFPLRLKRPWPPGLPSFQGLKDDNLTISNQLLWLRDTADRGLQSLSFQGFGVSPWMQPRLDTSMLNSPTNMYQAMATTAVQDMRTLDPSKQHATSFFQFQQPQNFPQRTAALMQAQILQQSQPQQAFQSNQENQHLSQSMASTQTQLQQQQQQVVDHQQISSASAMSQFVSTLQPHSPPTQAQSSLCQRQNFSDSNVIPVTGASVSPLHGFLGSFSQDESFHLLNLPRTSSWVPVQPSTAWPSKGVAVDPLLSSGASQCILPQLEQSGQLQGMMSQNVVSLPPFPGRECAVDQGSTDPQNNLLFGVNIEPSSLIVQNGMSSLKGVGSNSDSTPGHFQLSNYLITTGTDSSLNQGMSPSIVESDFLETSDNAGQGNLTNKTFVKVYKSGSLGRSLDITKFGSYLELRSELACMFGLEGKLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVSCIKILSPQEVQQMGNNGLELLNSVPIQRLSNGICDDHISRQDPRNLSTGITTVGSLDY 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0235 873 Pfam Auxin response factor 247 329 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bisa07g0235 873 SMART B3_2 121 223 IPR003340 GO:0003677
Bisa07g0235 873 Pfam AUX/IAA family 730 825 IPR033389 -
Bisa07g0235 873 ProSiteProfiles PB1 domain profile. 740 824 IPR000270 GO:0005515
Bisa07g0235 873 Coils Coil 494 514 - -
Bisa07g0235 873 CDD B3_DNA 120 221 IPR003340 GO:0003677
Bisa07g0235 873 Gene3D - 736 829 - -
Bisa07g0235 873 Gene3D - 285 357 - -
Bisa07g0235 873 FunFam Auxin response factor 736 829 - -
Bisa07g0235 873 Gene3D - 119 222 IPR015300 -
Bisa07g0235 873 FunFam Auxin response factor 285 357 - -
Bisa07g0235 873 MobiDBLite consensus disorder prediction 484 519 - -
Bisa07g0235 873 Pfam B3 DNA binding domain 121 222 IPR003340 GO:0003677
Bisa07g0235 873 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 829 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bisa07g0235 873 MobiDBLite consensus disorder prediction 530 549 - -
Bisa07g0235 873 ProSiteProfiles B3 DNA-binding domain profile. 121 223 IPR003340 GO:0003677
Bisa07g0235 873 SUPERFAMILY DNA-binding pseudobarrel domain 109 250 IPR015300 -
Bisa07g0235 873 SUPERFAMILY CAD & PB1 domains 735 816 - -
Bisa07g0235 873 FunFam Auxin response factor 119 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0235 Bisa-ChrBisa07 6098696 6104218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0235 91 832 B3 DNA Binding Superfamily AT5G37020 52.282 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bisa07g0235 AUX_IAA 1.7e-06 CL0072