Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0229 ATGAGAACAATGAGGACAAAGGAGGCAATTCATGGAGACGAAATGCGCAAACAAAGCTATCCCTTGCTTCAAGACAAAGGGCTAGAAAAAGTGTCGCTACTAAAGAAATCGGCCAAAGCTAAGATTTCAGCCAGATGGGATCCAGTTGGAGCATGCCAGCCTTTAATTGATGAAGCCCCTGTATTCTATCCGACTGCTGAGGAGTTTGAGGATACCCTTGGTTACATAGCAAAGATACGTCCCCAGGCTGAACCACATGGCATATGTAGGATAGTCCCTCCATCTTCCTGGGTTCCACCCTGCCCTCTTAAGGAGAAAGATATTTGGGAAAATGCTAAATTTTCCACCCGTATTCAGCAAATTGACTTGCTTCAAAATAGAGAGCCCATGAGAAAGAAAACTAGGGGAAGGAAACGAAAATGTAGAAAGAACTCAAAAATGGCAACATGTAGCAGACGTGCCAATCCAGTTTCCGATGCTAATGTTGCTTCTAAATCTGAAGAGAAATTTGGCTTCCAAACAGGACCCGACTTCACGCTTAAAGACTTTCAGAAATATGCTCAGTTTTTTAAAGAATGCTATTTTAGAATGAGGGATATCAAGGGAGATGGAAAAATTAGTGATAATAATTACTGTAAGAGATGGGAGCCCTCTGTGGAGTTAATTGAAGGTGAATACTGGCGAATAGTTGAGCGACCAACTGATGAGGTTGAGGTGTTCTATGGAGCTGACTTAGAAACTGGGGCACTTGGAAGTGGATTTCCCAAGGCATCATCCTTAACTAAGAGTGATTCAGATCAGTATATCCTGTCTGGATGGAATCTCAATAATTTTCCACGACTGCCAGGTTCTGTGCTATGTTTTGAAGGAAGTGATATCTCAGGAGTTTTAGTGCCATGGCTCTATGTTGGGATGTGTTTTTCTTCATTTTGCTGGGTTACTCAACTATCTCCTTCAATTCTTAAATCTGAGGGAGTGCCTATATTTCGTACTGTCCAGCATGCTGGGGAATTTGTTATTACTTTCCCAAGAGCATACCATGCTGGCTTCAATTGTGGTTTCAACTGTGCAGAAGCAGTGAATGTTGCCCCTGTTGATTGGTTATTGCATGGCCAGAATGCTGTCGAGCTTTATAGTAAGCAGTGCCGTAAAACATCATTGTCACATGACAAATTGTTATTAGGATCAGCTCAGGAAGCTGTACAAGCCCTTGCAGAACTTGCTCTTGGAGGAAAGGAAACTCCAAAGAATTTAAAATGGAAAAGTATCTGTGGGAAAGATGGAGTTCTAACCAAAGCAGTTAAGACAAGGATAAAGATGGAACAAGCACGGTTAGAATGTCTTCCAGCTGATGTAAAGTTTCTCAAGATGGACATCAACTTTGATTTGGACAAGGAAAGAGAATGCTTTGCTTGCTTCTATGATTTATACCTCTCTGCTGCAGGCTGCGAGTGCTCTATTGACAAATATTCTTGTCTAAGTCACTCAAAATTGTTTTGTTCATGCGGAATTGACAAAAGATTTGTTCGACTTCGTTATACTATTAATGAGCTAAATAAGTTGGTTGAAGCATTAGAAGGACAGTCAGATGCTATAGAAGTGTGGGCAAATATGAACTCTAGCATCATTTCTGTGGATGCTGGGAATGTTTGTATCGGTAAGCCAGATGTGGACACAGACATGTGCAAAGTCAAGGTCTATGAAGTGGAAAGTTTGTCTTGTGCAGGAACCAAGAAGTCAAAATTAAATGAACGTAGTAGTACATGTAGTCATGTTTCTTCAGAGTTAGTCCAGTCAGATTCTCAAGTGGAAAGTGCTCCACAGGGCACTGTAGATAGCCACAATGACAATATTAACAACGAAAAATCAGTCATGGACAATGAAGTTAAGGTGGAGCAGAAATGTTCTGTGGATTTGAGTTTTGATGTTATGTCTGGTCAATATGAAAGTCATAAAAATAAGGGCATAGGTTGTGTTGAAAAAGTCCGGTATTCAGATGCCACAAAGGAACAAGATAATATGGTACTTGATGGTGTAGGAAATCTGTCAGACTTTTTTGCTCTTGTGAAGAAAGATTATCCATCATGTTCAAGGGATGCTTGTGATTCTGCTAATTTTGAAGGTAGTAAGCTGTTTGGGGTTAATCTACCAATGCATCTGAGTATGAGAGTACTACCTAGTAGTGAATTTAAAATGGAAGCAATGGACACTTTCAATACAAGTATGCCTTTGACAAACCAAAGCTTTCTAATTCAAAAGTTTGCTACCTCTGTTGAGCCTGTAAGCTTGGGCTCTGTTGTGTATAGAAAGCTGTGGTGCAGTAAGCACACAATTTACCCGAAAGGATTCAAGAGCCGTGTTAAGTTCTTCAGCGTACTCGATCCATCGAGAATCTGTAGCTATATTTCTGAAGTCCTTGATGGTGGGTTAATTGGACCTCTTTTCAAGGTTACCATGGAAGAACATCCAAGAAACGTTTTCACGAATGTCTCAGCAGAGAAGTGCTGGGAATCAGTTCTAGAGAGGATAAACAATGAAATCATTAGGCGCAGGAGCCTAGGGGAACTAAACAATCCTCCGTTGGAGCTTCTGCAAAGTATTGATGGTCTTAAAATGTTTGGATTCCTTTCCCCACCCATTATCCAGGCCATTGAAGCTCAGGATCCCAGTCATCAATGCATAGAGTACTGGAAACACAAGGAATTAATCTCTTCTATATCCTCTAGCAGAGCAAGTGATGAGATTAAGCTCGCTGAGTGCAGCTTGATTAGCCCTTTAGGTGATGTGAATGCCAAAGTTTTCGGTACCAACCTGACAAAGCTGGATCAATATAATAACCAACGTTTTGGTGCAAATCAGCATTCGTTCACCGAGATGAAATTGAAACTTGAAGGATTGTTGAAGAAAGCTAGTCCTGATGAGTTAAGCACAATGCATAGGCTATTAGGGTCTGATGATGCAGAGAGTTTTCGGGGGAGAGTGGCACTTGCAGGTCTGATTGAGGAGATCCAAAAAAGCTTGTAG 3024 0.4104 MRTMRTKEAIHGDEMRKQSYPLLQDKGLEKVSLLKKSAKAKISARWDPVGACQPLIDEAPVFYPTAEEFEDTLGYIAKIRPQAEPHGICRIVPPSSWVPPCPLKEKDIWENAKFSTRIQQIDLLQNREPMRKKTRGRKRKCRKNSKMATCSRRANPVSDANVASKSEEKFGFQTGPDFTLKDFQKYAQFFKECYFRMRDIKGDGKISDNNYCKRWEPSVELIEGEYWRIVERPTDEVEVFYGADLETGALGSGFPKASSLTKSDSDQYILSGWNLNNFPRLPGSVLCFEGSDISGVLVPWLYVGMCFSSFCWVTQLSPSILKSEGVPIFRTVQHAGEFVITFPRAYHAGFNCGFNCAEAVNVAPVDWLLHGQNAVELYSKQCRKTSLSHDKLLLGSAQEAVQALAELALGGKETPKNLKWKSICGKDGVLTKAVKTRIKMEQARLECLPADVKFLKMDINFDLDKERECFACFYDLYLSAAGCECSIDKYSCLSHSKLFCSCGIDKRFVRLRYTINELNKLVEALEGQSDAIEVWANMNSSIISVDAGNVCIGKPDVDTDMCKVKVYEVESLSCAGTKKSKLNERSSTCSHVSSELVQSDSQVESAPQGTVDSHNDNINNEKSVMDNEVKVEQKCSVDLSFDVMSGQYESHKNKGIGCVEKVRYSDATKEQDNMVLDGVGNLSDFFALVKKDYPSCSRDACDSANFEGSKLFGVNLPMHLSMRVLPSSEFKMEAMDTFNTSMPLTNQSFLIQKFATSVEPVSLGSVVYRKLWCSKHTIYPKGFKSRVKFFSVLDPSRICSYISEVLDGGLIGPLFKVTMEEHPRNVFTNVSAEKCWESVLERINNEIIRRRSLGELNNPPLELLQSIDGLKMFGFLSPPIIQAIEAQDPSHQCIEYWKHKELISSISSSRASDEIKLAECSLISPLGDVNAKVFGTNLTKLDQYNNQRFGANQHSFTEMKLKLEGLLKKASPDELSTMHRLLGSDDAESFRGRVALAGLIEEIQKSL 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0229 1007 SMART fyrn_3 764 808 IPR003888 GO:0005634
Bisa07g0229 1007 Pfam F/Y rich C-terminus 812 899 IPR003889 GO:0005634
Bisa07g0229 1007 FunFam Putative lysine-specific demethylase JMJ16 756 894 - -
Bisa07g0229 1007 Gene3D Cupin 314 417 - -
Bisa07g0229 1007 SUPERFAMILY Clavaminate synthase-like 272 402 - -
Bisa07g0229 1007 ProSiteProfiles FYR domain FYRN motif profile. 750 808 IPR003888 GO:0005634
Bisa07g0229 1007 MobiDBLite consensus disorder prediction 601 618 - -
Bisa07g0229 1007 SMART JmjN_1 58 99 IPR003349 -
Bisa07g0229 1007 Gene3D Cupin 44 313 - -
Bisa07g0229 1007 ProSiteProfiles JmjC domain profile. 221 379 IPR003347 -
Bisa07g0229 1007 PANTHER LYSINE-SPECIFIC DEMETHYLASE 56 314 - -
Bisa07g0229 1007 Pfam jmjN domain 60 93 IPR003349 -
Bisa07g0229 1007 SMART cupin_9 267 379 IPR003347 -
Bisa07g0229 1007 SMART fyrc_3 814 910 IPR003889 GO:0005634
Bisa07g0229 1007 ProSiteProfiles FYR domain FYRC motif profile. 810 901 IPR003889 GO:0005634
Bisa07g0229 1007 ProSiteProfiles JmjN domain profile. 59 100 IPR003349 -
Bisa07g0229 1007 Pfam F/Y-rich N-terminus 761 805 IPR003888 GO:0005634
Bisa07g0229 1007 Gene3D - 755 894 - -
Bisa07g0229 1007 MobiDBLite consensus disorder prediction 601 620 - -
Bisa07g0229 1007 Pfam C5HC2 zinc finger 469 521 IPR004198 -
Bisa07g0229 1007 Pfam JmjC domain, hydroxylase 313 362 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0229 Bisa-ChrBisa07 5967467 5982493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0229 752 938 JUMONJI Transcription Factor Family AT1G30810 50.267 8.27e-50 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bisa07g0229 FYRC 1.7e-21 No_clan