Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0147 ATGGTTTCTTCTTTTCCTCTTTCTCAGCCTACTACATACAGCTTCTCTCAAAACCAGTTGAAAGGTTTTCGCTATGACTTGCGGCGACCCAGCTTCTCATTTAGGAGTAATACCGGAAACAAAGTTCGGTCCATCAAAGCTTCGGTCGATGCACCCCCATTTCCCTTGTTTCAACCTCCCAAAGTTGAAGAATCGCCGTCTGAGTTGGAGCCAGCAGACCCTGATTTCTATAAGATAGGTTATATTAGAAGCATGCGAGCTTATGGAGTTGAATTTAAGGAAGGGCCTGACGGATTTGGTGTGTATGCTTCTAAAGATGTTGAGCCTCTTCGCCGAGCCAGGGTTATAATGGAAATTCCTCTTGAACTGATGTTAACCATTAGAAAGAAGCTCCCATGGATGTTCTTCCCTGATATAATTCCAGTGGGACATCCAATATTTGATATTATCAACTCAACAAATCCGGAGACAGATTGGCATCTAAGATTAGCGTGCCTCCTTTTATATGCGTTGGACTGTGAGGACAACTTTTGGCAGTTATATGGTGATTTCTTACCCAGTGCTGATGAGTGCACTAGCTTACTTCTGGCAACAGAGGAGGAGCTTTTGGAACTGCAGGATCCCAATCTTGCTTCTACCTTGAGGAACCAGCAACGCCATGCCTTGGAATTTTGGGAGAAGAACTGGCACGATGGTGTTCCCCTTAAAATAAAGCGTCTTGCTCGTGATCCTCGAAGGTTCATTTGGGCAGTTAGTATAGCACAATCACGGTGCATTAACATGGAAATGAGGATTGGTGCACTACATCAAGATGCAAACATGCTGGTTCCTTATGCTGACATGCTGAACCATTCATTTGAACCAAATTGTTTTTTCCATTGGCGTTTTAAAGACCGGATGCTTGAGGTGCTTATAAATGCTGGACAGCGGATTAGAAAGGGAGATGAGATGACAGTTGATTACATGGACAGACAAAAGAATGACATGTTTATGCAAAGATATGGGTTTTCGTCATCCGTGAATCCCTGGGATGTGATCAAATTCTCTGGAAACGCGTGTATTCATTTGGATTCCTTCTTGTCAGTGTTCAATATATCTGGCCTTCCAGAAGAGTATTATCATAACAGTCGTCTATCAAACATGGGAGATACTTTTGTTGATGGAGCAGTCATAGCTGCAGCACGAACGCTGCCAACTTGGTCAGATGGGGATGTGCCTCCAATCCCTAGCATGGAAAGAAAGGCTGTGAAGGAGTTACAAGAAGAATGCCAACGAATGCTTGTAGAATTTCCCACAACCTCTAAGCAAGACCAGAAATTGCTAGATTCTTTGCAAGATGCAACCAGGACGCTTGAAGCTGCAATAAAGTATAGATTGCACCGGAAATTGTTCATAGAGAAAGTCATCCAAGCATTGCACATCTATCAAGAGCGATTACTGTTCTGA 1446 0.4329 MVSSFPLSQPTTYSFSQNQLKGFRYDLRRPSFSFRSNTGNKVRSIKASVDAPPFPLFQPPKVEESPSELEPADPDFYKIGYIRSMRAYGVEFKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTIRKKLPWMFFPDIIPVGHPIFDIINSTNPETDWHLRLACLLLYALDCEDNFWQLYGDFLPSADECTSLLLATEEELLELQDPNLASTLRNQQRHALEFWEKNWHDGVPLKIKRLARDPRRFIWAVSIAQSRCINMEMRIGALHQDANMLVPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGQRIRKGDEMTVDYMDRQKNDMFMQRYGFSSSVNPWDVIKFSGNACIHLDSFLSVFNISGLPEEYYHNSRLSNMGDTFVDGAVIAAARTLPTWSDGDVPPIPSMERKAVKELQEECQRMLVEFPTTSKQDQKLLDSLQDATRTLEAAIKYRLHRKLFIEKVIQALHIYQERLLF 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0147 481 SUPERFAMILY SET domain 97 336 IPR046341 -
Bisa07g0147 481 ProSiteProfiles SET domain profile. 77 322 IPR001214 GO:0005515
Bisa07g0147 481 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 333 478 IPR036464 -
Bisa07g0147 481 Gene3D set domain protein methyltransferase, domain 1 82 336 - -
Bisa07g0147 481 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 67 457 - -
Bisa07g0147 481 FunFam Plastid transcriptionally active 14 358 478 - -
Bisa07g0147 481 Pfam Rubisco LSMT substrate-binding 410 462 IPR015353 -
Bisa07g0147 481 CDD SET_LSMT 89 336 - -
Bisa07g0147 481 Pfam SET domain 98 321 IPR001214 GO:0005515
Bisa07g0147 481 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 82 336 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa07g0147 SET 2.4e-20 No_clan