Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0146 ATGGATATTTCATTGGGTGGTGCTGGTGGGTCTGGTGATGAGCACAACGCTTTCAACTCTCAGATGGGAAAGAAGTCTGGCCATCGTCACACTGCGTCTCAAATACAACGACTTGAAGCGTTTTACAAGGATTGTCCCCATCCTGATGAAAATCAACGTAAAGAATTAGGCGCGGCGCTGGGGCTTGAGCCAAAACAAATTAAGTTTTGGTTTCAAAACAAGAGGACTCAAGTAAAAACCCTGAATGAACGAACAGATAACAATGTCCTTCGTGCTGAGAATGAAAGAATGCAATGCGAGAACATCGCAATCAAAGAGGCACTGAAGGGTGTAAACTGCCCTTCTTGCGGTAGTTCTGCCTTTGGCGATGAAGAACGCCAACTTGCTCTCCAAAATCTGCTTCAGGAAAATTCATATCTAAGACAAGAGGCTACTTCAAGGCTTCTTACGAGTTACGTTGGGAAGCCGGCGAGGCCAGAAATGGATATGGTGGCTCCTTCTCCTACACCTCTGACCCTTGGATCTGCATCTGCATCTGCATCAGAAAGTCCGAAACCTGAAGGGACTTTTCTGGGAGGTCTGGGTCATGTTTCGATTTCGGACGATAATACTACGTTTTTGACAAACCAGCAAGATATGGGAAAGTCAGTAATGTGGGAAACTGCGACTAGTGCCATGGAAGAGCTGGTCAAGCTTCTGCTAGTGAATGAGCCCTTGTGGATCAAGTCTCAGTCTCAAGCAGCTCCGGAAGAAGAAGACGAACAAGGGGCATTCTTCGTTCTTAACCATGACAGCTACGAAAGGATAATCCCTAGGGCTCAGTCTCGTCACTACAGGAGTTCCAATGCACGTGTCGAATCATCCAAAGCTTCGCGAATTGTGAAGATGAGCGCAATGGAATTGGTCCACATGTTCTTAGATTCGGAGAAATGGGTTTACATTTTCCCGACAATCGTGACGAAAGCACAAACAATAAAAGTAGTTGAAAGTGGTTCGCCAGGAAGCCGGACTGGAGCCTTGCAGCTGATGTACGAAGAAATGCACATTCTCACACCAATGGTGCCTCCTCGGGATTTCGTCTTCCTTCGCTATTGTTACCAATTGGACAGAGCCACGTGGGTGATAGCTGACGTGTCATTTGATTCCTCCGAAGGCAATCATATTGCTCATTCTGCCTCTTGGAGGCTTCCTTCTGGATGCATGATTCATGAATTGCCCGATGGTTCCTCCAAGGTTACTTGGGTGGAGCATGTGGAAGTGGATAGTAAAACTGTAACTCACCAACTATATAGAGATGTTGTTTATAACAATGTTGCTTATGGAGCAGAAAGATGGGTTGTGGCTCTTCAAAGAATGTGTGAGAGAATTGCATGCTCCTTGACTGATAATATACCTAGTGATGAAGCTAGAGGAGTGGCAAGCTTACCTGAAGGAAGAAAGAGCTTGATGAGGGTTTCTCATCGAATGATGAAGGACTTGTGTGGAGCTATAAACATGTCGTTCCCTCACTTAAGTGAAGTGAATGAGAATGGGGTTAAATTGTCGTTTCGCAAGAACTTTCAAAGAGGCCAACCAGGTGGCATGGCAGTTTGTGCTGCTACATCCCTTTGGCTTCCTCTCCCTCCTCACCATGTTTTTGATTTCCTCAAAGATGAGACACGAAGAGATCAGTGGGATATTCTTTCCAACGGTAGTCCAGCGCAAGAGATTGGACGCATCTCAACTGGAACTCATCCTGGCAACTACATCGCAATTTTTAAGCCATACATCCCCACTGAGAACCACGTTCTGATTCTTCAAGAAACTTGTGTGGAGCCAATGGGATATGTGGTAGCCTACGCTCCGGTCAATACGTCGGCCATGAATGAAGTTACAAATGGAGGAGAGTCTTCCGGCGTGCCGGTCGTGCCATCCGGCTTCGTCGTCACGGGGGACGGCTTGCGACACCCCGTTTCTGCAAGTGGAGGCGAAAACTCAGGAGGAAGAGGAGGAGGGTCAATACTCACAGTGGCCTTCCAAGTATTGGCTTGTAGCCCTGCAGCAGTGAGCCGCTTCAACATGGAATCTGTGTCTTCTGTCAACTCACTCATAGACACAACACTCCAGAAAATTAAGCTTGCGTTGAATTGTTAA 2133 0.4679 MDISLGGAGGSGDEHNAFNSQMGKKSGHRHTASQIQRLEAFYKDCPHPDENQRKELGAALGLEPKQIKFWFQNKRTQVKTLNERTDNNVLRAENERMQCENIAIKEALKGVNCPSCGSSAFGDEERQLALQNLLQENSYLRQEATSRLLTSYVGKPARPEMDMVAPSPTPLTLGSASASASESPKPEGTFLGGLGHVSISDDNTTFLTNQQDMGKSVMWETATSAMEELVKLLLVNEPLWIKSQSQAAPEEEDEQGAFFVLNHDSYERIIPRAQSRHYRSSNARVESSKASRIVKMSAMELVHMFLDSEKWVYIFPTIVTKAQTIKVVESGSPGSRTGALQLMYEEMHILTPMVPPRDFVFLRYCYQLDRATWVIADVSFDSSEGNHIAHSASWRLPSGCMIHELPDGSSKVTWVEHVEVDSKTVTHQLYRDVVYNNVAYGAERWVVALQRMCERIACSLTDNIPSDEARGVASLPEGRKSLMRVSHRMMKDLCGAINMSFPHLSEVNENGVKLSFRKNFQRGQPGGMAVCAATSLWLPLPPHHVFDFLKDETRRDQWDILSNGSPAQEIGRISTGTHPGNYIAIFKPYIPTENHVLILQETCVEPMGYVVAYAPVNTSAMNEVTNGGESSGVPVVPSGFVVTGDGLRHPVSASGGENSGGRGGGSILTVAFQVLACSPAAVSRFNMESVSSVNSLIDTTLQKIKLALNC 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0146 710 SMART START_1 220 455 IPR002913 GO:0008289
Bisa07g0146 710 Pfam START domain 222 455 IPR002913 GO:0008289
Bisa07g0146 710 MobiDBLite consensus disorder prediction 170 184 - -
Bisa07g0146 710 SUPERFAMILY Bet v1-like 212 456 - -
Bisa07g0146 710 ProSiteProfiles 'Homeobox' domain profile. 21 81 IPR001356 GO:0003677
Bisa07g0146 710 CDD START_ArGLABRA2_like 215 454 - -
Bisa07g0146 710 MobiDBLite consensus disorder prediction 1 32 - -
Bisa07g0146 710 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 24 709 IPR042160 -
Bisa07g0146 710 ProSiteProfiles START domain profile. 211 458 IPR002913 GO:0008289
Bisa07g0146 710 SUPERFAMILY Bet v1-like 474 646 - -
Bisa07g0146 710 FunFam Homeobox-leucine zipper protein HDG1 11 97 - -
Bisa07g0146 710 Gene3D - 11 98 - -
Bisa07g0146 710 MobiDBLite consensus disorder prediction 158 193 - -
Bisa07g0146 710 SMART HOX_1 23 85 IPR001356 GO:0003677
Bisa07g0146 710 SUPERFAMILY Homeodomain-like 12 81 IPR009057 -
Bisa07g0146 710 Gene3D - 270 448 IPR023393 -
Bisa07g0146 710 CDD homeodomain 24 79 IPR001356 GO:0003677
Bisa07g0146 710 Pfam Homeodomain 28 79 IPR001356 GO:0003677
Bisa07g0146 710 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0146 Bisa-ChrBisa07 3049073 3060445 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0146 24 709 Homeobox Transcription Factor Family AT1G73360 42.157 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa07g0146 START 3.3e-38 CL0209