Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0138 ATGTTGGCGACGACGTCGTTTGGCCCTGGCTGCGCCTTCCCTTTGGCCACCACCGTTGGAGCATTCAAATCCAATTCACGCAATCCCTTTCCTCTAAAGCTCAGAGCATCTCTGCACGACGATCCTCTTGCAAGCAAAATTGTGGTCAAGAATTTACCATATTACACTGGTGAGACCAATCTTGAGAAGGAATTCTCAAATTTTGGCGAGATAGTTGAAGTTAAAGTGGTTAAAGACACCACGAAAAGATCAAAGGGATATGCTTTCATTCAGTACTCATGTCAAGATGATGCCATTCTTGCTCTAGAAACCATGGATAAGAAGGTATTTGATGGCCGCATGATTTATGTAGAACTTGCAAAACCTGGAAGGGATGCTTTTGGTGGACGCCTAAAGACCTCAGGGCCCCCAAAGAAGTGGCATTTGCCAGAGCAAGAGGAAGTGGCGGATTGCTGGTACTGA 462 0.4589 MLATTSFGPGCAFPLATTVGAFKSNSRNPFPLKLRASLHDDPLASKIVVKNLPYYTGETNLEKEFSNFGEIVEVKVVKDTTKRSKGYAFIQYSCQDDAILALETMDKKVFDGRMIYVELAKPGRDAFGGRLKTSGPPKKWHLPEQEEVADCWY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0138 153 CDD RRM_SF 47 118 - -
Bisa07g0138 153 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 44 142 - -
Bisa07g0138 153 SMART rrm1_1 46 118 IPR000504 GO:0003723
Bisa07g0138 153 Gene3D - 33 140 IPR012677 -
Bisa07g0138 153 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 45 122 IPR000504 GO:0003723
Bisa07g0138 153 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 47 115 IPR000504 GO:0003723
Bisa07g0138 153 SUPERFAMILY RNA-binding domain, RBD 45 127 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0138 Bisa-ChrBisa07 2902687 2909724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0138 31 132 Eukaryotic Initiation Factors Gene Family AT4G34110 33.028 1.40e-11 59.3