Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0123 ATGGCAGTATCAGTAAGGATGCTTCGAACACTTGCTACTGTGTGGTTCTTTTGTTTCTCTTCTGTGTTACTCCTCTGCCATGGCGAGTCAGATAGTGATGAGTCAACATTGAGGTTGCTTTTGGAGGTGAAGAAGTCATTCGTGGAAGACCCAGAAAACGTATTGGCTGAATGGTCCGAGAACAACACGGACTACTGTAGCTGGAGAGGCGTCGCTTGTGGGTTAAACTCCATTGATGACTCAGTCATAATAGTGGGACTCAACCTTTCAGACTCGTCGCTCACTGGGTCACTATCGCCCTCACTCGGTCTCTTCCACAACCTGCTCCACCTTGATCTTTCTTCTAACCGCCTCACGGGTCCCATCCCACCTAATCTCTCCAGTGTATCTTCTTTGGAATCTCTGCTTTTATTCTCTAACCAACTAACTGGCCACATCCCCACTGAGTTAGGCTCGCTCACGAGTCTCCGAGTCATGCGGATCGGCGACAACTCACTCACTGGTCCGATCCCTTCATCTTTCGGGAATTTAATCAATCTCGTGACCCTTGGCCTGGCCTCTTGCAGTCTCACTGGGTCTATTCCACCACAACTGGGACGACTCAGTCAGATGGAGAATCTGGTTTTACAAGATAATGAACTCACTGGTCCTATTCCGGCCGAGTTGGGAAACTGTTCAAAGCTCACCGTTTTGACCATTGCGAACAACAGACTCGATGGGTCCCTCCCGAGTGCACTCGGTTTGCTTCAGAATCTCCAGGTTTTCAACATTGCTAATAACAGTATAACAGGGGAGGTTCCGAGTCAACTCGGTTATCTGAGTCAACTTGTTTATCTGAACTTCATGGGAAACCAACTCGAGGGTCGTATTCCCTCGTCTTTAGCTCAACTGGGTAATCTTCAAAATCTGGACTTGTCGATGAATAAGCTCTTTGGTGGGATTCCAGAAGAATTGGGGGAAATGGGCAAGTTACAGTACATGGTTCTTTCTGGGAATCGCCTCTCTGGGGTCATACCAAGAGGCATATGTTCCAATTTGACGAGTTTGGAGCATTTGATGTTGTCAGATATTGAACTTTCCGGTGAGATTCCAGGCGAACTAGGCCAATGTAAATCCATGAAACAGCTTGATTTGTCTAACAATTCGTTGAATGGATCGATACCTGTTGAGATTTATGGGTTGCATGGCTTAACTGATTTATTGCTTCACAACAACAGCTTGATTGGTTCGATCTCTCCCTTCATAGGGAATCTCAGTAACTTGCAGACACTTGGATTGTTCCACAACAATTTACAGGGGGCTCTGCCTAAAGAGATTGGGATGCTTAAAGAGCTGCAAATACTCTATCTTTATGATAATCAATTATCAGGGGAGATTCCTAGAGAAATTGGTAAGTGTTCGAGCATGCAAATGATTGATTTATTCGGAAATCGCTTTAATGGGGAAATTCCCATCACTATTGGAAGGCTCAAAGAGTTGAATTTCCTTCATCTGAGGCAGAATGAGCTTGTGGGTGAGATTCCTGCCACCTTGGGTAATTGTCACAAGCTAAATATTCTGGATTTGGCAGATAATTATCTCTCAGGTGGAATTCCTTCAACGTTTGGATTCCTGAGATATTTAAAGCAACTTATGCTATATAACAACTCCCTTGAAGGTGATCTCCCTCACCAATTGGCAAACATGAAGAATTTGACAAGGGTAAATATTTCAAAGAACAGACTGAATGGTAGTTTATCTGCGTTGTGTAGCTCTCGGAACTTTCTATCTTTTGATGTCACCGACAATGCATTTGACGGGGAAATTCCACCCCAGCTTGGCACTTCACCCTCCCTTGATAGGCTAAGATTAGGTAACAACAAGTTCTCCGGTGAAATTCCGAGGACATTGGGAAAAATCCATGAATTGTTTTTGTTAGATCTCTCTGGAAATTCTCTCACTGGACCAGTACCTGCCGAGCTTTCCTTGTGCAACAAGTTAGCTCATATTGATTTGAACAATAATATGCTATCTGGGCCAATACCATCATGGCTTGGAAGTTTGCCTCAGTTAGGGGAGCTTAAGCTTTCCTTCAATCAATTTTCTGGGGGTCTTCCACTGGAGCTATTCTCATGTTCCAAATTGCTAGTTCTCTCTCTGAATTGGAATTCTCTTAAGGGAAGCATTCCTGCATATATTGGTAACCTCACATCCCTGAATGTCCTCAATCTTGACCATAACAACTTCTCTGGACCTATCCCTCCTGCCATAGGAAAGTTAAGCAAACTTTATGAGCTGAGAATGTCCAGAAACAGCTTCAATGGTGAGATCCCAAGTGAGCTTCGAAAACTCCAGAATCTCCAAAGCATTTTAGACCTCAGTTACAACAATCTCTCTGGTGAAATCCCACCTTTGATTGGGACTATGTCGAAGTTGGAAGAGCTTGATCTTTCTCACAATCAACTCACTGGGGAAGTTCCTGTACAAATTGGTGAAATGAGCAGCTTGGGAAAGCTTGATCTCTCTTACAATAACCTTCGAGGTGAGCTAAATGAGCAGTTCTCCCACTGGCCAGCTAAGTCATTCGAAGGCAATCTACTTTGTGGAAGCCCTCTTAGGCATTGCAACAATGGTGTCGTAGGCAGTCACCAATTAGGCCTTAGTAAATCATCGGTAGTGGTAATCTCAGCTCTTTCAACTTTAGCTGCAATTGCACTGGTAATACTTGGCGTGAGAATGTTTATGAAAAACAAGCAAGAATTTCTCCGAAAAGGCGGCCAGGGGAACTTTGTTTACTCTTTCTCATCTTCATCACAAGCGCAGCGAAGACCACTGTTCCGATTAAACGGTGCTGGAAAGCGAGACTTGAGGTGGGATGACATCATGGAGGCCACAGACAATCTAAGCGATGAGTTCATTATTGGTTCAGGAGGTTCCGGGACAATCTACAAAGCCGAATTGCCAACAGGAGAAACAATAGCTGTCAAGAAAATTTCAGGGAAAGACGATTATCTATTGAACAAGAGCTTTATGAGAGAAGTTAAGACTCTTGGAAGGATTCGACATAGACACCTGGTGAAGCTGATGGGTTATTGCAGCAACAGAAGCCAAGGAGGAGATTGGAATCTGTTGATATATGAGTTCATGGAGAATGGGAGTGTGTCGGATTGGTTGCACGGGAAGCCAGAAAAGATGAGCAAAACTAGGAGGAGGCTTGACTGGGAAGCAAGGTTCAAAATTGCAGTGGGACTAGCTAGAGGAGTGGAATACCTGCATCATGACTCTGTGCCAAAAATCATTCACAGGGACATCAAATCCAGCAATATTTTGCTGGATTCCAAAATGGAGGCTCACTTGGGAGATTTTGGATTGGCAAAAGCACTCAATATTGAGAATTATGACTCCAACACCGAGTCTAATTCTTGGTTTGCTGGCTCTTATGGCTACATTGCTCCGGAGTGTGCGTACTCACTGAAGGCGACCGAAAAAAGCGATGTATATAGCCTGGGTATTGTGCTCATGGAACTTGTGAGTGGGAAAATGCCGACAGATGATGCTTTTGGACCAGAGATGGATATGGTGAGATGGGTGGAGGTGCACTTTGACATGCAAGAAGACAATGGCGGTCGTGAGGAATTGATTGATCCTCAGCTCAAGCCACTTTCACCAGCTGAACAATTTGCTGCATTCCAAGTGCTTGAGATTGCCTTGCAGTGCACTAAAACGACGCCGCTGGAGAGACCATCCTCACGTCAAGTGTGCGATCTTCTCCTTCATGCATTCAACAACAGAGTGGTTGATTTTGAGAAGCTGAATCTTGGTCAGTACAAGTGA 3813 0.4451 MAVSVRMLRTLATVWFFCFSSVLLLCHGESDSDESTLRLLLEVKKSFVEDPENVLAEWSENNTDYCSWRGVACGLNSIDDSVIIVGLNLSDSSLTGSLSPSLGLFHNLLHLDLSSNRLTGPIPPNLSSVSSLESLLLFSNQLTGHIPTELGSLTSLRVMRIGDNSLTGPIPSSFGNLINLVTLGLASCSLTGSIPPQLGRLSQMENLVLQDNELTGPIPAELGNCSKLTVLTIANNRLDGSLPSALGLLQNLQVFNIANNSITGEVPSQLGYLSQLVYLNFMGNQLEGRIPSSLAQLGNLQNLDLSMNKLFGGIPEELGEMGKLQYMVLSGNRLSGVIPRGICSNLTSLEHLMLSDIELSGEIPGELGQCKSMKQLDLSNNSLNGSIPVEIYGLHGLTDLLLHNNSLIGSISPFIGNLSNLQTLGLFHNNLQGALPKEIGMLKELQILYLYDNQLSGEIPREIGKCSSMQMIDLFGNRFNGEIPITIGRLKELNFLHLRQNELVGEIPATLGNCHKLNILDLADNYLSGGIPSTFGFLRYLKQLMLYNNSLEGDLPHQLANMKNLTRVNISKNRLNGSLSALCSSRNFLSFDVTDNAFDGEIPPQLGTSPSLDRLRLGNNKFSGEIPRTLGKIHELFLLDLSGNSLTGPVPAELSLCNKLAHIDLNNNMLSGPIPSWLGSLPQLGELKLSFNQFSGGLPLELFSCSKLLVLSLNWNSLKGSIPAYIGNLTSLNVLNLDHNNFSGPIPPAIGKLSKLYELRMSRNSFNGEIPSELRKLQNLQSILDLSYNNLSGEIPPLIGTMSKLEELDLSHNQLTGEVPVQIGEMSSLGKLDLSYNNLRGELNEQFSHWPAKSFEGNLLCGSPLRHCNNGVVGSHQLGLSKSSVVVISALSTLAAIALVILGVRMFMKNKQEFLRKGGQGNFVYSFSSSSQAQRRPLFRLNGAGKRDLRWDDIMEATDNLSDEFIIGSGGSGTIYKAELPTGETIAVKKISGKDDYLLNKSFMREVKTLGRIRHRHLVKLMGYCSNRSQGGDWNLLIYEFMENGSVSDWLHGKPEKMSKTRRRLDWEARFKIAVGLARGVEYLHHDSVPKIIHRDIKSSNILLDSKMEAHLGDFGLAKALNIENYDSNTESNSWFAGSYGYIAPECAYSLKATEKSDVYSLGIVLMELVSGKMPTDDAFGPEMDMVRWVEVHFDMQEDNGGREELIDPQLKPLSPAEQFAAFQVLEIALQCTKTTPLERPSSRQVCDLLLHAFNNRVVDFEKLNLGQYK 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0123 1270 Gene3D Ribonuclease Inhibitor 151 227 IPR032675 -
Bisa07g0123 1270 Gene3D Ribonuclease Inhibitor 296 376 IPR032675 -
Bisa07g0123 1270 Pfam Leucine rich repeat 516 575 IPR001611 GO:0005515
Bisa07g0123 1270 Pfam Leucine rich repeat 783 839 IPR001611 GO:0005515
Bisa07g0123 1270 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 581 871 - -
Bisa07g0123 1270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1092 1104 IPR008271 GO:0004672|GO:0006468
Bisa07g0123 1270 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 484 580 - -
Bisa07g0123 1270 SMART LRR_typ_2 249 273 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 346 370 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 105 128 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 729 753 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 129 153 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 490 514 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 562 585 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 394 418 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 826 857 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 802 824 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 177 201 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 442 466 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 321 345 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 681 705 IPR003591 -
Bisa07g0123 1270 SMART LRR_typ_2 297 319 IPR003591 -
Bisa07g0123 1270 PRINTS Leucine-rich repeat signature 373 386 - -
Bisa07g0123 1270 PRINTS Leucine-rich repeat signature 802 815 - -
Bisa07g0123 1270 Pfam Leucine Rich Repeat 107 128 IPR001611 GO:0005515
Bisa07g0123 1270 Gene3D Ribonuclease Inhibitor 36 150 IPR032675 -
Bisa07g0123 1270 Gene3D Ribonuclease Inhibitor 228 295 IPR032675 -
Bisa07g0123 1270 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 290 389 - -
Bisa07g0123 1270 Pfam Protein kinase domain 966 1247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0123 1270 SUPERFAMILY L domain-like 52 240 - -
Bisa07g0123 1270 ProSiteProfiles Protein kinase domain profile. 961 1255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0123 1270 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 590 1251 - -
Bisa07g0123 1270 SUPERFAMILY L domain-like 185 478 - -
Bisa07g0123 1270 SUPERFAMILY RNI-like 589 846 - -
Bisa07g0123 1270 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 33 196 - -
Bisa07g0123 1270 Gene3D Phosphorylase Kinase; domain 1 924 1041 - -
Bisa07g0123 1270 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 203 274 - -
Bisa07g0123 1270 SMART serkin_6 961 1255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0123 1270 SUPERFAMILY Protein kinase-like (PK-like) 948 1250 IPR011009 -
Bisa07g0123 1270 SUPERFAMILY L domain-like 479 627 - -
Bisa07g0123 1270 ProSitePatterns Protein kinases ATP-binding region signature. 967 990 IPR017441 GO:0005524
Bisa07g0123 1270 Gene3D Transferase(Phosphotransferase) domain 1 1042 1263 - -
Bisa07g0123 1270 Gene3D Ribonuclease Inhibitor 535 872 IPR032675 -
Bisa07g0123 1270 Gene3D Ribonuclease Inhibitor 377 534 IPR032675 -
Bisa07g0123 1270 Pfam Leucine rich repeat N-terminal domain 38 73 IPR013210 -
Bisa07g0123 1270 FunFam Leucine-rich repeat receptor-like protein kinase 1042 1266 - -
Bisa07g0123 1270 FunFam Uncharacterized protein 390 483 - -
Bisa07g0123 1270 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 921 1041 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0123 Bisa-ChrBisa07 2481818 2485819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0123 40 706 Receptor kinase-like Gene Family AT1G17750 36.553 1.55e-104 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa07g0123 Pkinase 4.9e-43 CL0016