Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0121 ATGGCATCGTCCCAAGTTGAGATTGCCGTAACTTCACCGTTCGGTTGCGTTTTGAGGAAGTACGACAGCCACAGACAGAGAGGCAGATTCCAGAAGGAGGTGACCAATTTCGTGAACGATCACCTTAACAACAACAACAACAATACCTCCGGTGGTGGCTCCGTTTCCTCGGACGATGATAAGAACAGTAGGAACACCCCTAGCCCTAACAACCGAATCGAAAATGTAGGACGACTCATCAAATGTAATAGCGAGAGAGACGAACCCTCTCAATGGGCGGCGAGAAAAGCAAAAGAAATGGTGTCAACAATTGAGACGGAAGCAGAACTCTTAGAGACTTTGCCAAACATGGAAAAACCTGGTCCTTCGACTTCCTCTGAAATCTCAAAGGCTTCTTCGCTTGTTCAAATATGGGAGAAGAGGCTTAGCAAGTCAAACTCAAACTCTGTGGGATCTGTATCGGATGATTCATCACCCTCCTCACCAGAGGCTGTTTCTCACGAATCAGCCTGTTCAACACCACGAGCACGTAGCAGTAATAATAATAATAATAATAATAAGACTGAGTGGGATGGTAATAATAATGCAACAGAGAGTGAGAGAGTAAGAGTGGCGGATATTATTAAGAAACTGAAGAACGAACAGCAAGATCATCTGGCACATCTTCGGCTGAAATTATTACAACGTCGCCAAGCTGCTGCTTCTTCCCACCATGACTCTACTTCTCAAGTGAATAAACAACCACAAGGATCTACAATTATGCACTTAAGGGAAAAATTTAGCATCAAGGTTGAACATGGGAGTGCATTCCAAACAGAAGTAGCTGGTCCGAGGACTCCCCACCCTCGCCACCTCATCAGAGACTCTTATACTCATCATTCTCACAGCCACGTAGTTCATGGCAACGACAGCAACAATTATGACACTGTAGAAGTACGTGGTGAGAAGCCAGTGTCTCATTCTAAGGATCAGGAAGTTCATGCAAGTTCTTCAGAAACAAGCCTTGGGCCTCAAACTGTTGTGCCACAAGAAATAATTGCCGAACCACCATCATTGTCCTCTCCTTCTTCAAATAGGGTAGAATCAGATGCAAATCATGAGACAGAGAATAGTGCGAAGGTAGAGGCAGAGGCAGAGGCAAAGCAGGAGGAGGAGCATAATACTGTGAGTGTTGAGGCTGAAAGCAGTCATGTGATTGCGAACGAAGAAACAATTGAAGAGGAAAATGCGAGTGATGACCAACAGCAGTATGATTATGATGAAGAGGGTGGTGAGCTGCCTTATGATTATGAAACTAATTATTACGATTGGATCAGTCATATTTCGCGGCCCAGGAGTTATTGGGAAGATCGCAGACAAGCTTGGTATAAGGAGATGCTTGACGCTGCTGCTTCTGACAAAGGGGAGATTCGTCAGCTCCTTGAAAGAAGAACAGTGTCAACTTTCCTTTCTAGTGACTTCCGAGTAAGAATGGACAAATTGATGGAGTCTCACGTAGGAACACAAACACTTTTTGTCAATAGCCAAGAGGATGAGGAAGACCAGTTAATGGCATTTTTACAGCAACATCTTGCTCGCAACTTTGAAGAAAACGAAGGAGGAAGGCAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGAAAGAAGTGGAGAAGGGAGAGGAAGAGGAAGAGGAAGGGGAAAGAAGCCTGATGGAAGGTCCTTGTAATAATGAAGAAGCGAATGAATATTTTATTGAGTCCTCACCATCAACACATCTTCCTAACAGCATTGCCTCTCCTGATTTGTCGAGATGGAGTTATAGAGACAACATCGAAGCCAGTGATGAGTGTGATAGAGTTGAATCTACAGCCTCAACACAACCTTCTCAATGTCAGTATTTCTACCAAGATAGTCAGCTGTACTCATCATCCACCACTCGTAATTCAATTGAAATGGATATCGTATATGATTTGAAACGGCAGATAGAGCAACTCCATCAAGAAATGTCTGAGATGAGAAGAGCATTGAAGAGCAGCTTGGATATGCAGGCTCTATTACAACAATCAATGAAACTAGATGTTAACACAGTTAAAGAGAAGAAGAAGAAGAAAAACTCCCATGATCACAAGGGACCTAAAAAAGGCAATTGTTGTATTTGCTATGAGAAGAAAGTTGATTCAGTTTTATACAGATGCGGGCATATGTGTGCATGTCTGAAGTGTGCCAATGAGTTGCAATGGAACAGCGGGAAATGCCCAATATGTCGTGCTCAAATCGTAGATGTTGTGAGAGTATTTGTGGATGCATAG 2361 0.4346 MASSQVEIAVTSPFGCVLRKYDSHRQRGRFQKEVTNFVNDHLNNNNNNTSGGGSVSSDDDKNSRNTPSPNNRIENVGRLIKCNSERDEPSQWAARKAKEMVSTIETEAELLETLPNMEKPGPSTSSEISKASSLVQIWEKRLSKSNSNSVGSVSDDSSPSSPEAVSHESACSTPRARSSNNNNNNNKTEWDGNNNATESERVRVADIIKKLKNEQQDHLAHLRLKLLQRRQAAASSHHDSTSQVNKQPQGSTIMHLREKFSIKVEHGSAFQTEVAGPRTPHPRHLIRDSYTHHSHSHVVHGNDSNNYDTVEVRGEKPVSHSKDQEVHASSSETSLGPQTVVPQEIIAEPPSLSSPSSNRVESDANHETENSAKVEAEAEAKQEEEHNTVSVEAESSHVIANEETIEEENASDDQQQYDYDEEGGELPYDYETNYYDWISHISRPRSYWEDRRQAWYKEMLDAAASDKGEIRQLLERRTVSTFLSSDFRVRMDKLMESHVGTQTLFVNSQEDEEDQLMAFLQQHLARNFEENEGGRQEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEKEVEKGEEEEEEGERSLMEGPCNNEEANEYFIESSPSTHLPNSIASPDLSRWSYRDNIEASDECDRVESTASTQPSQCQYFYQDSQLYSSSTTRNSIEMDIVYDLKRQIEQLHQEMSEMRRALKSSLDMQALLQQSMKLDVNTVKEKKKKKNSHDHKGPKKGNCCICYEKKVDSVLYRCGHMCACLKCANELQWNSGKCPICRAQIVDVVRVFVDA 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0121 786 MobiDBLite consensus disorder prediction 233 251 - -
Bisa07g0121 786 SUPERFAMILY RING/U-box 733 778 - -
Bisa07g0121 786 MobiDBLite consensus disorder prediction 230 251 - -
Bisa07g0121 786 Coils Coil 194 214 - -
Bisa07g0121 786 CDD mRING-HC-C3HC5_NEU1 731 783 - -
Bisa07g0121 786 SMART ring_2 734 772 IPR001841 -
Bisa07g0121 786 MobiDBLite consensus disorder prediction 405 425 - -
Bisa07g0121 786 MobiDBLite consensus disorder prediction 39 73 - -
Bisa07g0121 786 PANTHER BNAC05G24000D PROTEIN 1 217 - -
Bisa07g0121 786 Pfam Zinc finger, C3HC4 type (RING finger) 731 778 - -
Bisa07g0121 786 Coils Coil 526 586 - -
Bisa07g0121 786 MobiDBLite consensus disorder prediction 314 425 - -
Bisa07g0121 786 Coils Coil 672 699 - -
Bisa07g0121 786 ProSiteProfiles Zinc finger RING-type profile. 734 773 IPR001841 -
Bisa07g0121 786 MobiDBLite consensus disorder prediction 534 585 - -
Bisa07g0121 786 Coils Coil 364 386 - -
Bisa07g0121 786 MobiDBLite consensus disorder prediction 362 391 - -
Bisa07g0121 786 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 708 785 IPR013083 -
Bisa07g0121 786 MobiDBLite consensus disorder prediction 39 75 - -
Bisa07g0121 786 MobiDBLite consensus disorder prediction 144 197 - -
Bisa07g0121 786 MobiDBLite consensus disorder prediction 529 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0121 Bisa-ChrBisa07 2465578 2473266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0121 734 782 C3H Transcription Factor Family AT3G06140 40.816 5.66e-07 50.8