Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0112 ATGCATCCTAAGAGAGAACTCTGCAGAAACTTTCAGCGTGGCAGCTGTCAATATGGAGAAAGGTGTAAATTTCTTCATGTGTTGCAACAACAGCAAAGGTCTAATGTTCCTTCATTTGGGGCACAGAATAGTTCACACCCAAAGCAAACTGCAAATCATTTTGGATTTGGGTCCCATGCTGGTTCAAACCAACAGAATAAGACCAATCCTTTTGGATTTGGTATGCAGTACAGCTCCCAATCAACTGGGGGTTCTGATTTAGAATTCAAACAACACCAATTCAAGCCTTTTGAAAACAAATGGACTCGACCTTCTTCCTCACCGCCGAATGGTCCTACACGTAGAAGTGATGGCCATTCCCAGCCAGTGAATCATAAGTGCACAGATCCTGACATTTGCAAACGCCAAATTGCAGAAGATTTTGAACAGGAGAAACCACTTTGGACGCTTACATGCTACGGTCATTGTAAAGGGTGGGCAACAATTCCAGCTTTTTTTTTTTTTTTTTTGTGGGCGGTTGTGGTTGGTGTTGATTAG 537 0.4264 MHPKRELCRNFQRGSCQYGERCKFLHVLQQQQRSNVPSFGAQNSSHPKQTANHFGFGSHAGSNQQNKTNPFGFGMQYSSQSTGGSDLEFKQHQFKPFENKWTRPSSSPPNGPTRRSDGHSQPVNHKCTDPDICKRQIAEDFEQEKPLWTLTCYGHCKGWATIPAFFFFFLWAVVVGVD 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0112 178 MobiDBLite consensus disorder prediction 35 88 - -
Bisa07g0112 178 SMART c3hfinal6 2 28 IPR000571 GO:0046872
Bisa07g0112 178 ProSiteProfiles Zinc finger C3H1-type profile. 3 29 IPR000571 GO:0046872
Bisa07g0112 178 SUPERFAMILY CCCH zinc finger 3 30 IPR036855 GO:0046872
Bisa07g0112 178 MobiDBLite consensus disorder prediction 35 128 - -
Bisa07g0112 178 MobiDBLite consensus disorder prediction 98 118 - -
Bisa07g0112 178 Gene3D - 1 71 - -
Bisa07g0112 178 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 3 27 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa07g0112 zf-CCCH 3.3e-11 CL0537