Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0107 ATGTATCAACCAAAGAGTGTTCATGCTTCAAGTCTAGTTGGCAGCAACTCATTGGTGCATGGTCAGCAATTTGATTGTGGTGGCACTACAATGGATCCAGTCAATGGAGGGAACAATCTCACGAAGAATCCTAATCTCATCTCAAAGCAACGCTTACGATGGACACATGAACTCCATGAACGCTTTATTGATGCTGTGGCACAACTTGGGGGGCCAGATCGTGCCACACCTAAAGGTGTCCTCAGGGTGATGGGCGTAGAAGGCTTAACAATATATCATGTCAAAAGCCATCTGCAGAAATATCGACTTGCTAAATACCTCCCTGACTCCACATCTGATGGGAAAAAAGCCGACAAGAAAGAAACAGGGGATATGCTTTCCAATCTAGATGGTTCATCAGGGATGCAAATTACGGAAGCACTAAAGCTGCAAATGGAGGTGCAGAAGCGATTACATGAGCAATTAGAGGTTCAGAGACAGCTGCAATTACGGATTGAAGCCCAGGGTAAGTACTTGAAGAAGATAATTGAAGAGCAACAGCGGCTCAGCGGGGTTCTGTCAGAAGCGCCTGGATTGGGGGATGCAGCCTCAGCGCCGGGCGATATCTGGCAAGAACCTGACAATAAGACTGACCCAGCAACCCCTGCCCCCACATCCGAGTGCCCTCTTCAGGAAAAGGCTACTAAAGAACGAGCCCCGGCCAAGAGTTTTTCAGTGGACGAATCCTTTTCATCTCAGCATGAACCGTTGACACCAGATTCTGGCTGCCAGGTTGGTTCCCCTACTGACAGCCCAAAGGCGGAGAGATTGACAAAGAAGAGCACAGAGGGAGCATATTGCAGACCAGAAATGGTGCTTCCGCATCAGATACTGGAGTCAAGCATGTCGTCGTGTCACCAACTAAACACAGTTTTCCTTTCGCAGGAGCAGTTTGATCCTTCTTTAGGTATATCTACTAGAAGTAACGAGGAATTGGGGGACCTGGGTGGTTGCAACATGTGA 1002 0.482 MYQPKSVHASSLVGSNSLVHGQQFDCGGTTMDPVNGGNNLTKNPNLISKQRLRWTHELHERFIDAVAQLGGPDRATPKGVLRVMGVEGLTIYHVKSHLQKYRLAKYLPDSTSDGKKADKKETGDMLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEAPGLGDAASAPGDIWQEPDNKTDPATPAPTSECPLQEKATKERAPAKSFSVDESFSSQHEPLTPDSGCQVGSPTDSPKAERLTKKSTEGAYCRPEMVLPHQILESSMSSCHQLNTVFLSQEQFDPSLGISTRSNEELGDLGGCNM 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0107 333 MobiDBLite consensus disorder prediction 109 125 - -
Bisa07g0107 333 MobiDBLite consensus disorder prediction 190 275 - -
Bisa07g0107 333 NCBIfam myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Bisa07g0107 333 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Bisa07g0107 333 Gene3D - 48 107 - -
Bisa07g0107 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Bisa07g0107 333 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 42 323 IPR044848 GO:0003700
Bisa07g0107 333 MobiDBLite consensus disorder prediction 238 261 - -
Bisa07g0107 333 FunFam Myb family transcription factor 48 106 - -
Bisa07g0107 333 Pfam MYB-CC type transfactor, LHEQLE motif 135 181 IPR025756 -
Bisa07g0107 333 Coils Coil 138 158 - -
Bisa07g0107 333 MobiDBLite consensus disorder prediction 109 131 - -
Bisa07g0107 333 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0107 Bisa-ChrBisa07 2072906 2076474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0107 84 333 G2-like Transcription Factor Family AT2G01060 63.137 2.84e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa07g0107 Myb_DNA-binding 1.6e-08 CL0123