Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0086 ATGGAGGACGATTGGGATCTCCACGCCGTCGTCCGAGGCTGCGCAGCCGTGGCCTCTACTACAACAACTACCACCTCCTCCGCCGCCTCCGCCGTAGCCGCCGCTAGCAGCAGCAGCGGAAGCAGCAATAGCATTTCTTATTCCTCTGTTTCTTCTTCCTCTGCTGGTCTTGGGTATCCCATGTTTCCAATCTTGGAATCAAAGGGTTTGAGTTTGAATTCCTCCGTTGCACAATTGCATGAGCTTTGTAAGCCTAATAATTTCTTCTTCCCTAAATGTCACCTTCCTAATCCCTTCCAACTCCAAACTTCTTCTGCTTCTTCTTCTTCTTCTTCTTCCTTCTCTTATTCTTCTTCCTCTGCACCCAAATCAGCTCAGACTCACACACACCAGAAACAACAACATCTCCTTCATGGTAAGCACTCTCATGTTGGGTCTGTCACCACCCCAAAATCCAAAAAAAGGAAGAACCAGCTCAAGAAAGTTTGTCAGGTTCCAGCTGAATCTCTCTCCTCGGACATTTGGGCATGGCGGAAATATGGGCAGAAACCCATTAAAGGGTCACCATATCCAAGATGTAGCAGCTCCAAAATGTGCTTGGCCCGAAAACAAGTGGAGCGAAACAGATCCGACCCGGCAATGCTCATAGTCACCTACACGGCGGAACACAATCACCCTGCCCCGACACATCGAAACGCTCTTGCCGGCTCTACCAGACAGAAGTCCCTCGTCACTGCCGCCAGCCACTTCGAGGAGGATTCGTCGAAACCCATTTCTCCGGCGACTTCCGGGGCAAAAGAAGAGCTCGCATCTCAGGGTACAACGAGGTCCGAAAGCAAAGAAGACGAAAATGAATTTGGGTTATCGGATATTGAGCTGACAGATGATTTCTTCGACGGTTTAGATGAACTAACGAGGTCGCCGACGCCGGCGCCTACGGCGGGCGAACACTGA 954 0.5063 MEDDWDLHAVVRGCAAVASTTTTTTSSAASAVAAASSSSGSSNSISYSSVSSSSAGLGYPMFPILESKGLSLNSSVAQLHELCKPNNFFFPKCHLPNPFQLQTSSASSSSSSSFSYSSSSAPKSAQTHTHQKQQHLLHGKHSHVGSVTTPKSKKRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRCSSSKMCLARKQVERNRSDPAMLIVTYTAEHNHPAPTHRNALAGSTRQKSLVTAASHFEEDSSKPISPATSGAKEELASQGTTRSESKEDENEFGLSDIELTDDFFDGLDELTRSPTPAPTAGEH 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0086 317 MobiDBLite consensus disorder prediction 231 249 - -
Bisa07g0086 317 MobiDBLite consensus disorder prediction 255 272 - -
Bisa07g0086 317 Pfam WRKY DNA -binding domain 173 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa07g0086 317 Gene3D WRKY domain 155 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa07g0086 317 MobiDBLite consensus disorder prediction 225 317 - -
Bisa07g0086 317 MobiDBLite consensus disorder prediction 117 163 - -
Bisa07g0086 317 SUPERFAMILY WRKY DNA-binding domain 169 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa07g0086 317 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 305 IPR044810 GO:0003700
Bisa07g0086 317 SMART WRKY_cls 171 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa07g0086 317 MobiDBLite consensus disorder prediction 117 132 - -
Bisa07g0086 317 ProSiteProfiles WRKY domain profile. 166 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa07g0086 317 MobiDBLite consensus disorder prediction 273 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0086 Bisa-ChrBisa07 1755709 1756976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0086 1 304 WRKY Transcription Factor Family AT4G01250 43.450 5.13e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa07g0086 WRKY 2.5e-17 CL0274