LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa07g0081	ATGATGGACACACCAGACCCACCAAATCTTCCAGCCCAGTCGCCTCAGCCATTACCACCACCATTAATGGCTGCACCACTGGCCGGAAACCTTTTGAATCCTCAAGGCGATTTTCCAGACAATATTGACTGGGTTAGCCTTTTGTCTGACGAAAACAGCTTCTTGTTTGGGGATCTTGCTAAGCCAGATATGGAGTGCAGTGCTTCGTCATCATTATCATCTTCTTCTTCTTCTTCTTGTTCCTCTTTGATGGCTGAGAGCAACAATATTAATATTGGAGGAGAGGGGAATGAGGAGAAAAGAAGAGGTGGAAGATTACTGAAGAAGAGAACTACTCCAAGGTTTGCGTTTCAGACTAGAAGTGCAGATGATATTCTGGACGATGGTTATCGTTGGAGGAAATATGGGCAGAAAGCTGTTAAGAATAGCATACATCCCAGAAGCTACTACAGGTGCACCCATCACACTTGCAGTGTGAAGAAACAAGTACAAAGGCTAACCAAAGACACAAGCATCGTTGTGACTACTTACGAGGGAATTCACAACCATCCTAGCGAGAAGCTTATGGAAACCCTAACTCCACTTCTCAAGCAAATGCAGTTTCTGATTTCTGGAGTCTAG	621	0.4444	MMDTPDPPNLPAQSPQPLPPPLMAAPLAGNLLNPQGDFPDNIDWVSLLSDENSFLFGDLAKPDMECSASSSLSSSSSSSCSSLMAESNNINIGGEGNEEKRRGGRLLKKRTTPRFAFQTRSADDILDDGYRWRKYGQKAVKNSIHPRSYYRCTHHTCSVKKQVQRLTKDTSIVVTTYEGIHNHPSEKLMETLTPLLKQMQFLISGV	206

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa07g0081	206	ProSiteProfiles	WRKY domain profile.	121	186	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g0081	206	SUPERFAMILY	WRKY DNA-binding domain	119	185	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g0081	206	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	73	186	IPR044810	GO:0003700
	Bisa07g0081	206	Gene3D	WRKY domain	111	185	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g0081	206	FunFam	WRKY transcription factor 57	112	186	-	-
	Bisa07g0081	206	MobiDBLite	consensus disorder prediction	1	28	-	-
	Bisa07g0081	206	Pfam	WRKY DNA -binding domain	127	184	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g0081	206	SMART	WRKY_cls	126	185	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa07g0081	206	MobiDBLite	consensus disorder prediction	1	24	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa07g0081	Bisa-ChrBisa07	1641497	1643733	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa07g0081	89	204	WRKY Transcription Factor Family	AT5G41570	68.103	3.69e-55	172

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bisa07g0081		WRKY	5.6e-25	CL0274