Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0073 ATGTCCTACCTCACCAACCTCGGCCTCGGCTACTCCATCGCCATCGCCCTCGCCTTCCTCGTTCTCCTCTCCACCCTCATCCTCTCCTCCTACCTCTGCTGTCGCAATCGCCCCCGCACCGCCCACCCCCACAACCCCAACCCCACCGGGTCGACCTCGAACCCGAGCTCCGATGGTATTGTTCTACCCCGGATAATTTTCGTGGCCGAGGACGAAGACGATGCTGGGCGTGACGAGGAGAGCGCCGTCGTGGGCCTGGAACAGAACGTCATCAACTCCTACCCCAGGTTCCAGTACTGCAAGGATACGATGGTCGTCGGGAGTAGTACGACGTGTTCGATCTGTTTGTGTGAGTACAAGGAGTCGGAGATGCTAAGGATGATGCCCGAGTGTCGACATTACTTCCACATCTGCTGCCTCGACGCCTGGCTCAGGCTCAACGGGTCCTGCCCTGTTTGCCGGAACTCGCCGCTCCCGACGCCGCTCTCGACGCCTCTCCAAGAAGTGGTGCCGCTCTCTCAGTACGCGGCTGACCGGAGAAGGAGGAGAAAATGGGGAATGGAGGAAGGAGTGAGTGAAAGGGTAGTAGTTGTAGTTGTATTTACAGGATATATGAAATCTTTCAATATCCTCAGTTCAGAAGATTCAGGAATGCCAAACCAGAACTTTACAGCTATCAAGTTTAAAATATGGAGAGGGTTTTACTGTTCAATCTTTGTACTAGGTGCTCTTGCTCTTCTCGTCTCTGTTGCTACCTTATCTAAATTATTTATCTTCAGATCATTTATTGGCACTGAATCTCTATGCACCGATGAGAACCTTGAGGAACTGAAGGAAATACAAAACGAGGCAAGTATGACGGTGAAAATTGTAATGCAGAAAATTCAACAAGAATTGCAGAGCTTGAGAGATGCAGAGCTAGAAGCATCATCTTCATCATCTGCCTCTGTGCTGAAACGGAGTGCCTTTCTCGCTGATATTTTAGGACTTCTTGAGTCAGCGGAGGCATCCCTTCACCGGACTGGCAGGGAAAAGATCCGCTCTATAGCTTCTCATCCACTTATGAAAGCGAATAAACAACGATCAGATGAGCCGGCTGATTATTTTCTGAGAGAGGAGATTCGCAAGTACGTGAGGATCAAGCCTAACAGGTTGAGAAAGCAGAATTTCATGGGGGCCAATGGAACCTTCACCAGCATTGGACATGCTTGCTTCGCCATGAAGGAAGATCTGGAAGAATACATGGATTATGACATTGGCGAAATCTGCAATGATGACTGGAAACTAGCTCAGAAACTCATGGTTCATGGCTGCGATCCTCTCCCAAGGAGAAGGTGCTTTTCCAGAGCACCTAAGCTGTACAGCCAGCCACTTCCCATCAATGAATCCCTCTGGAAACTCCCAGATGATAGAAATGTCCGATGGAGCCAATACCGGTGCAAGAACTTCACTTGCCTCGCCGGGAACACCGCTCGAAAGGGATTCTTCAAGTGCTCCGACTGCTTCAACCTCACTCATCATGAAATGCCCAGATGGGTAAGATTAGATTTAGATCCCAGTCTTCCAGATCAGACTTGTGATTTTCTTATCTCCGATGTGCTCCAAATCAAGGCAGGAGAGATCAGAATAGGATTGGACTTCAGTGTAGGAACCGGTACTTTTGCTGCGAGGATGAAGGAACACGATGTGACTATAGTTTCTGCAACTATCAACCTGGGAGCTCCCTTCAGTGAGTTCATAGCTCTGAGAGGACTTGTTCCTCTCTATTTAACAATAAATCAACGGCTTCCGTTCTTCGATAACACCCTTGATTTGATCCACACGACGAGGTTTCTGGACGGGTGGATCGATTTCGTGCTGCTGGATTTTGTGCTGTATGATTGGGATAGAGTGCTGAGGCCAGGGGGGTTGCTGTGGATTGACAGCTTCTTTTGTTTGAAGGAAGATTTGGAAGATTACTTGGAGGCTTTTAAAATGCTGAGGTACAAGAAGCACAAGTGGGTGGTTGTTCCCAAGCTTGATAAGGATGATCAAGAGCTGTTCTTTTCTGCTGTCTTAGAGAAACCACCTAGACCATTCCGATGA 2085 0.4878 MSYLTNLGLGYSIAIALAFLVLLSTLILSSYLCCRNRPRTAHPHNPNPTGSTSNPSSDGIVLPRIIFVAEDEDDAGRDEESAVVGLEQNVINSYPRFQYCKDTMVVGSSTTCSICLCEYKESEMLRMMPECRHYFHICCLDAWLRLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYAADRRRRRKWGMEEGVSERVVVVVVFTGYMKSFNILSSEDSGMPNQNFTAIKFKIWRGFYCSIFVLGALALLVSVATLSKLFIFRSFIGTESLCTDENLEELKEIQNEASMTVKIVMQKIQQELQSLRDAELEASSSSSASVLKRSAFLADILGLLESAEASLHRTGREKIRSIASHPLMKANKQRSDEPADYFLREEIRKYVRIKPNRLRKQNFMGANGTFTSIGHACFAMKEDLEEYMDYDIGEICNDDWKLAQKLMVHGCDPLPRRRCFSRAPKLYSQPLPINESLWKLPDDRNVRWSQYRCKNFTCLAGNTARKGFFKCSDCFNLTHHEMPRWVRLDLDPSLPDQTCDFLISDVLQIKAGEIRIGLDFSVGTGTFAARMKEHDVTIVSATINLGAPFSEFIALRGLVPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLDFVLYDWDRVLRPGGLLWIDSFFCLKEDLEDYLEAFKMLRYKKHKWVVVPKLDKDDQELFFSAVLEKPPRPFR 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0073 694 SMART ring_2 112 153 IPR001841 -
Bisa07g0073 694 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 250 692 - -
Bisa07g0073 694 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 535 657 IPR004159 GO:0008168
Bisa07g0073 694 SUPERFAMILY RING/U-box 111 158 - -
Bisa07g0073 694 Gene3D Vaccinia Virus protein VP39 523 672 IPR029063 -
Bisa07g0073 694 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 158 IPR013083 -
Bisa07g0073 694 ProSiteProfiles Zinc finger RING-type profile. 112 154 IPR001841 -
Bisa07g0073 694 Pfam Ring finger domain 111 154 IPR001841 -
Bisa07g0073 694 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 499 667 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0073 Bisa-ChrBisa07 1506051 1509750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0073 3 174 C3H Transcription Factor Family AT5G06490 38.378 1.48e-30 117