Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0067 ATGGAAGGCGTGCACCCAATACCTCGAACAGTGGAGGAGGTTTTCAGCGACCTTAAGGGCAGACGAACTGGAATGATTAAGGCCCTAACGACGGACGTTGAAAAGTTCTACCAGCAGTGCGATCCTGAGAAGGAAAACTTGTGTCTATATGGATTTCCAAATGAAACATGGCAAGTGAATTTACCAGTTGAGGAGGTGCCTCCTGAACTTCCGGAGCCAGCATTAGGTATAAACTTTGCTAGGGATGGGATGCAAGAGAAGGACTGGTTATCGCTGGTTGCAGTTCACAGTGACTCATGGCTGCTTGCTGTTGCTTTCTATTTTGGTGCCCGATTTGGATTTGGTAAGAATGAAAGGAAAAGGCTTTTTCAAATGATAAATGATCTCCCAACCTTATTTGAAGTAGTAACAGGAAGTGCTAAGCAATCGAAGGATCAATCAGCTGCCCACAACAATGGTAGCAAAAGCAAATCAAGTGGGAAGTCCCGCCAATGTGAGACTGAGGCCAAGGGAGTGAAGATGTCGCCGCCACCCAAAGAAGAGGAAGAGAGTGGAGAAGACGATGAAGCAGATGATGAACAAGGCGCAACATGTGGGGCATGTGGTGATAATTATGCCAACGATGAGTTCTGGATTTGCTGTGATGTGTGTGAGAGATGGTTCCATGGCAAATGTGTAAAAATTACTCCTGCTAAGGCCGAGCACATTAAGCAATACAAGTGCCCAAGCTGCAGTAACAAGCGGTCTAGAGTCTAG 756 0.463 MEGVHPIPRTVEEVFSDLKGRRTGMIKALTTDVEKFYQQCDPEKENLCLYGFPNETWQVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTLFEVVTGSAKQSKDQSAAHNNGSKSKSSGKSRQCETEAKGVKMSPPPKEEEESGEDDEADDEQGATCGACGDNYANDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRSRV 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0067 251 MobiDBLite consensus disorder prediction 143 160 - -
Bisa07g0067 251 ProSiteProfiles Zinc finger PHD-type profile. 195 247 IPR019787 -
Bisa07g0067 251 FunFam PHD finger alfin-like protein 191 246 - -
Bisa07g0067 251 SUPERFAMILY FYVE/PHD zinc finger 186 249 IPR011011 -
Bisa07g0067 251 MobiDBLite consensus disorder prediction 161 180 - -
Bisa07g0067 251 ProSitePatterns Zinc finger PHD-type signature. 198 244 IPR019786 -
Bisa07g0067 251 Pfam PHD-finger 198 247 IPR019787 -
Bisa07g0067 251 SMART PHD_3 197 245 IPR001965 -
Bisa07g0067 251 MobiDBLite consensus disorder prediction 143 193 - -
Bisa07g0067 251 CDD PHD_AL_plant 198 247 IPR044104 -
Bisa07g0067 251 Pfam Alfin 10 138 IPR021998 GO:0006355|GO:0042393
Bisa07g0067 251 PANTHER CPG BINDING PROTEIN 8 250 IPR045104 GO:0006355|GO:0042393
Bisa07g0067 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 251 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0067 Bisa-ChrBisa07 1402907 1407667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0067 1 248 Alfin-like Transcription Factor Family AT1G14510 79.920 4.11e-133 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Bisa07g0067 Alfin 1.2e-68 No_clan