Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0061 ATGTCAGAAATGCGGGTTTCTGATCTCCACTTGAAGAAGGAGCTTTTCCAAATTCGTAAAGCTGCTCGTGTATTAAGGGATCCTGGCACAACATCTACCTGGAAGTCACCACTTAGTTCCTCAAGATCTGTCGCTGCTGCTTCTGCATGGAAGAACAATGGCAACTCTCAGCTACATTCTCAGTTCTCTCTCCCAAGTGGGAACACCAGTGGGAAGGAGAAGATGGTGTTCTTGTACAATTTGAAGAATTACAAATCGTCAATCGAGAAGCACAACGGCGATGATAAAGGGGAATATGAAGAAGACGAGGAAGATGGTGGTGGCAACGATGGATCTTCGTCCCTTTTGGGAAGTTTCGAGGATAGCATGAGTGATGCTCGCAATGGTTGCGATTCGAAGAGCGATACTTACTTGGGGGGTGGTGGAATTCGTACTTCCATTTTCAGGTGTAAAGATGCAAATCTTGTTTCGTTAGGTACACCATCGGCCAGAAGAGCAATGGGCATTAAGAAAAAGAGTAAGAAAACCAATAATACCCATTTGGATATTTTAAGAAAATATCAGCTAAGAGAAGCAATTCTTGGTAAAAATTCAGTAAATTCCAAGCATCGGTCAGTGGCTTATAGCAGGGAGGACTCAGTTGAGCAGTCGGATGATACTGAAGATTACTGTAATTCTGAAGATTTAACACGAAACTTAGGGCCATCTCCATTGCTTTTGAAGCTCAAGCATAAGAATTGGTCTCGCTCTAATAAGTTCCTGAGAAGTAGTAGAAAGGAGGATTCTTCTTATAGTACCCCTGCAATGTCTACTAGTTCGTATAATAGGTATGGTCACCGTAATCCAAGTACTGTTGGATCCTGGGATGGCACTACAACCTCGGTGAATGACGGGGATGATGAGGTAGATGATCCTTTGGACTTGCCTGGCCGCCAGGGGTGTGGTATTCCTTGCTATTGGTCAAAGAAGACTCCAAAACATAGAGGGATGTGTGGGAGTTGTTGTTCACCTTCACTCTCAGACACTCTAAGGAGAAAAGGAAGTAGCATACTCTGTGGAAGTCAAACTATTTATCCTAGACACCGGAGATCCTTATCAAGCTCCAACAAGCGGAGAATTTCCTCAAGGAGCGCACAAGGTGTTCTCCCATTGCTCACTAATAGCCATGATGTTGGAGGAGGGTCATCTCTAGGAACTGGAAGGAGTGATGATGAACTTTCTACAAACTTTGGGGAGCTCGATCTGGAGGGTATAAGCCGGTTGGATGGAAGAAGATGGTCAAGTTGTAGGAGTCAAGAAGGATTGGAGATTGTAGCTTTTAATGGAGAAGGGGATGAGGAAGGCATGCCAGAAAATACTAGGAGTTTCAGTCAGAAGTATAAACCTATGTTCTTTAGTGAGTTAATTGGGCAGAATATTGTGGTCCAGTCACTTATAAATGCTGTTTCAAGGGGTCGAATTGCTCCTGTTTATATTTTCCAAGGTCCGCGTGGGACTGGTAAAACATCAACAGCCATGATTTTTGCTAGTGCATTGAACTGTATAGCTCCTGATGAAAGTAAACCTTGTGGCTACTGCAGGGAATGTACTGATTTCATTTCTGGCAAGAGCAGGTATCTTTTAGAAGTTGATGGAACTAATAAGAAAGCGATTGATAGAGTTAGGCATCTATTGAAAAGATTATCTATGGGGTCTTCATCAGCTTCCTCACGATACATGGTCTTTGTTATTGACGAGTGTCATTTGTTACCTTCTAAGACATGGCTTGCATTTCTCAAGTTTTTGGAAGATCCACCTCAACGAGTTGTCTTCATTTTTGTAACAACTGATCTTGACAATGTGCCCCGAACAATACAATCTAGATGCCAGAAGTACCTTTTTAACAAAATTAAAGACGTAGATATTGTGGCCCGGCTGAGAAAAATATCTGCTGAGGAGAACCTGGACGTTGAAATGGATGCGTTGGATCTTATTGCTACAAATGCTGATGGTTCACTTCGGGATGCAGAAACTATGTTAGAACAGCTGAGTTTGCTGGGAAAAAGAATTACTACTTCTCTTGTCAATGAACTTGTGGGTGTTGTTTCAGATGAAAAACTGCTGGAACTTTTGGAGTTAGCGATGTCATCAGATACTGCAGAAACAGTGAAGAGGGCCAGAGAATTTATGGACTCTGGAGTTGATCCCATTGTTTTGATGTCCCAACTGGCTAGCCTCATTATGGACATTATTGCTGGATCCTATACTGTCATAGATGACAAACCTGGTGACTCATTCTGTGGTGGACGAAGTTTGACTGAATCAGAGTTGGAGAGACTGAAGCATGCTTTAAAGCTTCTCTCAGAGGCTGAGAAACAGTTAAGGACTTCTAATGAACGCTCCACATGGTTCACAGCTACTCTGTTACAGCTTGCTTCAATGCCCTCTCCAGATCTTACTCAGTCCACTAGCAGCAGGAGGCAGAGCTGCAAGACAACTGATGATGATCCATCAAGTGCTTCAAGGGAAGTAACTGCTCACAAGAATAAGTCAGATGTTCAGTTTAGGCCTCAAAAGTCAACATCATCTGCATCCCTCCAAATAGCTGTCAATACTAATACTGGTCATCAAAGGGAGTTATCATCAAAGTTTGATGGTTTCAGCTTGAAGTCAAAGCTGTCGAATATCCCAGTCATAGATGATGATGTCACACCTGGCTTATGTGATGATGATCTTACAGTTACTAATGTGATGTTTAGATGCATAGATTCAGTAAAGTTACATGATATCTGGGCACGTTGTATTGGGAGGTGTCACTCAAAGACATTGAGGCAGTTGCTACATAATCATGGAAAACTTGTATCCATATGTGAAGTTGAAGGTCTTCTGGTTGCATATATTGCATTTGGGGATGGAGATATTAAAGTTAGGGCTGAAAGGTTTTTGAGCAGCATTACAAACTCCATGGAAATGGTTCTCAGACGAAATGTAGAAGTCAGGATTATCCACTTGCCTGATGGTGAAGGTGAAGATCCTATCAATCTACCAGGCCTAATGCAGGCCGAGTCAATAATAGCAAGTGAGAAGGAACCTAGAGGAGATCATGCAAAAGGAAGACATGCCTATTCTGATGTTCCTCCTTTGCTGGATGTAAAATTTCAATCTGTCAATGATTCATCAGATTTACTGGCTGATGGAAATGGTGTAAGAGAGAGGAGACCGAATATTCCAATGCAGAGGATTGAATCCATTATTCGTGAGCAGAGGCTGGAAACTGCCTGGTTACAGGCCGTAGAAAAAGGTTCCCCTGGATCATTGAGTCGCTTGAGACCTGAGAAGAATCAAGTCCTTCCTCAGGAAGGTATCTACTGTAAAGATCCAACAGAGTTAATGGACTCAACCAGGTTTTCCTCTCAGCATTGGGAAGATGACATCAATCATGAAGTCAAAGTTTTGAGAGTTCAAAAAGGAAGGGTCCTACAGAAGGATCAGATTGGCAAAAGGGACAATTGTTATCCCATGTCTCCTAGTTTATTGCATGATAGTAGTTTAGTGACAAATTCAATCAAAGACTGTCTGGGATATGAATCAGGCACAGGAGCTAGAGGTTGTAGTGGATTTTTATGTTGGAATAACAGTAACACCAAGCGTAGAAGGGTCAAGGTAAAAGGTACCCCAGTTGGAGGCAGGAAAGTTGGACACTTTTCGTTGTTTGGTGAATGCGGCAAGTCAAAGAAAAAAGAGTTGAGAATATAA 3735 0.423 MSEMRVSDLHLKKELFQIRKAARVLRDPGTTSTWKSPLSSSRSVAAASAWKNNGNSQLHSQFSLPSGNTSGKEKMVFLYNLKNYKSSIEKHNGDDKGEYEEDEEDGGGNDGSSSLLGSFEDSMSDARNGCDSKSDTYLGGGGIRTSIFRCKDANLVSLGTPSARRAMGIKKKSKKTNNTHLDILRKYQLREAILGKNSVNSKHRSVAYSREDSVEQSDDTEDYCNSEDLTRNLGPSPLLLKLKHKNWSRSNKFLRSSRKEDSSYSTPAMSTSSYNRYGHRNPSTVGSWDGTTTSVNDGDDEVDDPLDLPGRQGCGIPCYWSKKTPKHRGMCGSCCSPSLSDTLRRKGSSILCGSQTIYPRHRRSLSSSNKRRISSRSAQGVLPLLTNSHDVGGGSSLGTGRSDDELSTNFGELDLEGISRLDGRRWSSCRSQEGLEIVAFNGEGDEEGMPENTRSFSQKYKPMFFSELIGQNIVVQSLINAVSRGRIAPVYIFQGPRGTGKTSTAMIFASALNCIAPDESKPCGYCRECTDFISGKSRYLLEVDGTNKKAIDRVRHLLKRLSMGSSSASSRYMVFVIDECHLLPSKTWLAFLKFLEDPPQRVVFIFVTTDLDNVPRTIQSRCQKYLFNKIKDVDIVARLRKISAEENLDVEMDALDLIATNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELAMSSDTAETVKRAREFMDSGVDPIVLMSQLASLIMDIIAGSYTVIDDKPGDSFCGGRSLTESELERLKHALKLLSEAEKQLRTSNERSTWFTATLLQLASMPSPDLTQSTSSRRQSCKTTDDDPSSASREVTAHKNKSDVQFRPQKSTSSASLQIAVNTNTGHQRELSSKFDGFSLKSKLSNIPVIDDDVTPGLCDDDLTVTNVMFRCIDSVKLHDIWARCIGRCHSKTLRQLLHNHGKLVSICEVEGLLVAYIAFGDGDIKVRAERFLSSITNSMEMVLRRNVEVRIIHLPDGEGEDPINLPGLMQAESIIASEKEPRGDHAKGRHAYSDVPPLLDVKFQSVNDSSDLLADGNGVRERRPNIPMQRIESIIREQRLETAWLQAVEKGSPGSLSRLRPEKNQVLPQEGIYCKDPTELMDSTRFSSQHWEDDINHEVKVLRVQKGRVLQKDQIGKRDNCYPMSPSLLHDSSLVTNSIKDCLGYESGTGARGCSGFLCWNNSNTKRRRVKVKGTPVGGRKVGHFSLFGECGKSKKKELRI 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0061 1244 Gene3D - 447 628 IPR027417 -
Bisa07g0061 1244 MobiDBLite consensus disorder prediction 260 295 - -
Bisa07g0061 1244 NCBIfam DNA polymerase III subunit gamma/tau 455 804 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Bisa07g0061 1244 MobiDBLite consensus disorder prediction 89 135 - -
Bisa07g0061 1244 Pfam DNA polymerase III subunits gamma and tau domain III 684 810 IPR022754 GO:0003887
Bisa07g0061 1244 CDD HLD_clamp_pol_III_gamma_tau 630 693 IPR045085 -
Bisa07g0061 1244 Pfam DNA polymerase III, delta subunit 470 630 - -
Bisa07g0061 1244 SUPERFAMILY post-AAA+ oligomerization domain-like 701 803 IPR008921 GO:0003677|GO:0006260
Bisa07g0061 1244 FunFam DNA polymerase III subunit gamma/tau 631 693 - -
Bisa07g0061 1244 Coils Coil 763 793 - -
Bisa07g0061 1244 MobiDBLite consensus disorder prediction 201 228 - -
Bisa07g0061 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 479 677 IPR027417 -
Bisa07g0061 1244 Gene3D - 632 693 - -
Bisa07g0061 1244 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 458 839 - -
Bisa07g0061 1244 FunFam DNA polymerase III subunit gamma/tau 449 629 - -
Bisa07g0061 1244 CDD AAA 469 627 - -
Bisa07g0061 1244 MobiDBLite consensus disorder prediction 253 295 - -
Bisa07g0061 1244 MobiDBLite consensus disorder prediction 822 847 - -
Bisa07g0061 1244 MobiDBLite consensus disorder prediction 808 859 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0061 Bisa-ChrBisa07 1293679 1301330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0061 451 770 Core DNA Replication Machinery Family AT1G21690 23.708 3.93e-15 76.6