LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa07g0042	ATGGGTAAGGGTAAGGGTAAGGGCCCCCTCTCCTTCCGCTCCTCAAGCATCCGCCGCCGCCCAAAGAAGGCGGCTGATACTTCCCCACCATCGCCGCCGCAAAAGACGATCGGAGCGGTCGGCTCACCGGTTGGTGGTGGTGGGGCGATGGCAAAGGCCAAGAAGAAGACCGGCGTAGCGAGGTTGTGGATGAGGTTTAATCGGTCGGGCCAGTCGGAGCTTGTTGAGTTGGATAAGAACGCCATTATCAAGCTCGCGGCGATTCCGGCCCGGGATTTGAGAATTTTGGGCCCTCTCTTCTCCCACTCCTCCAATATCCTTGCCAGGGAGAAGGCAATGGTGGTTAATTTGGAGTTTATAAAAGCTATAGTCACAGCTGAAGAAGTGCTTATTCTTGATCCTCTTTGCCAGGAGGTTCTTCCATTTGTTGAACAGCTCAGGCAACAACTTCCGCATAAAACTCAACCTAGACTTCATGGCCATGCAGATGAACAAGAAAATGAAATGCTTGTTTCCACTGGTAGACAATGGTTACCAGTCCCAGAGTCTGCTGATGGTTTGCAAGCTGAGCTTCCATTTGAGTTTCAAGTTCTGGAGATTGCTTTAGAAGTTATCTGTACATATCTGGACTCAAGTGTGGCAGATCTTGAGAGGGGTGCTTATCCTGTATTAGATGAATTGGCTCGGAATGTTAGCACCAAGAATCTTGAACATGTGCGAAGTTTGAAAAGCAATCTTACACGTTTGCTGGCACGTGTGCAGAAGGTGCGGGATGAAATTGAACATCTGCTGGACGACAACCAAGATATGGCGCAGTTATATCTGACAAGGAAGTGGTTGCAGAATCAGCAATCTGAGGCTCTTCTGGGAACCACAGCCTCAAATACCCTTGCTACTGGAGCCCTTGTTCCTCATCTTGGTTCTAACAGAAGTGTAAGTCTTGCAAATAGCAATACTGTGGATGATTCTGATGTTGAGGATCTGGAGATGTTGCTTGAGGCATATTTTATGCAGTTGGATGGGACTCGTAACAAGATTTTATCTGTAAGAGAGTATATTGATGACACAGAGGACTACGTCAACATCCAACTTGATAGCCATAGAAATGAACTGATTCAGCTGCAGTTGACACTGACCATTGCATCGTTTGCCATTGCTATTGAGACTTTGATAGCTGGCGCATTCGGTATGAACATCCCTAATGTTTTAAATAACATTCACGGATTTTTCTGGCCATTCGTTGGGAGCACTACGGCAGCTTGCATTTTGCTTTTCCTCCTCGTTTATGGATATGCAAGATGGAAAAAGTTGCTTGGTTCTTAG	1323	0.4679	MGKGKGKGPLSFRSSSIRRRPKKAADTSPPSPPQKTIGAVGSPVGGGGAMAKAKKKTGVARLWMRFNRSGQSELVELDKNAIIKLAAIPARDLRILGPLFSHSSNILAREKAMVVNLEFIKAIVTAEEVLILDPLCQEVLPFVEQLRQQLPHKTQPRLHGHADEQENEMLVSTGRQWLPVPESADGLQAELPFEFQVLEIALEVICTYLDSSVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNQDMAQLYLTRKWLQNQQSEALLGTTASNTLATGALVPHLGSNRSVSLANSNTVDDSDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDSHRNELIQLQLTLTIASFAIAIETLIAGAFGMNIPNVLNNIHGFFWPFVGSTTAACILLFLLVYGYARWKKLLGS	440

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa07g0042	440	Gene3D	Magnesium transport protein CorA, transmembrane region	378	438	-	-
	Bisa07g0042	440	FunFam	Magnesium transporter MRS2-1	51	134	-	-
	Bisa07g0042	440	Coils	Coil	239	273	-	-
	Bisa07g0042	440	CDD	Mrs2_Mfm1p-like	63	437	IPR039204	-
	Bisa07g0042	440	Pfam	CorA-like Mg2+ transporter protein	326	428	IPR002523	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085
	Bisa07g0042	440	Gene3D	Magnesium transport protein CorA, transmembrane region	137	371	-	-
	Bisa07g0042	440	SUPERFAMILY	Magnesium transport protein CorA, transmembrane region	376	426	IPR045863	-
	Bisa07g0042	440	MobiDBLite	consensus disorder prediction	1	50	-	-
	Bisa07g0042	440	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	37	438	IPR039204	-
	Bisa07g0042	440	Gene3D	-	49	134	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa07g0042	Bisa-ChrBisa07	952847	957326	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa07g0042	6	440	MRS2 Gene Family	AT3G58970	67.857	0.0	566