Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0035 ATGGCTGGATTTTCCCGATCTGTATATCCCAAACTAGGTGAATGGGTGAAGGGAAAATTGGTAGGATCGGGATCTTTCGGCACTGTTCATTTGGCGATGAGCAAATCCACAGGAGGACTCTTCGTTGTGAAATCAGCACATACAGAAACAGAAGCTGGATTTAGGGTTCTAGAGAACGAGGTCAAAATTCTCGAGACTCTAGAATCATCACCTTACATAGTCCAATGCTTAGGGTCAGAAAGAGATGGAGGCAATCTCAATGTCCTAATGGAGTACATGGCTGGAGGCAGTTTGGCTGACGTGGCGGAGGAATTTGGCGGGTCATTGCCAGAAGAAGTGGTTCGTGTGTACACTAAGGAAATCCTTCAAGGCCTAATCCACCTTCATAACAATGGGATTGTTCATTGTGACCTCAAGTGTAAAAATGTCCTTCTGGGGTCTTCTGGGAACATCAAACTTGCAGATTTTGGATGTGCCAAAAGGGTTAAGGATCTGAAAAATGATGGAGATTTGGTGAAGAAGAAGAAGAAGAAGAAGAACTCTTTGCAATCTGTTACTGGGACCCCTCTATGGATGGCCCCTGAAGTTTTAAAGAATGAAGAGTTAGGTTTTGCTGCAGATATATGGTCTCTGGGATGTAGTGTGATTGAAATGGCCACTGGTAGGCCTCCATGGAGTGCGTCTAACGATGATGCTTTGATTTCAAACCCAATGGCTGCTCTTTTGAAGATTGCCTGTGGGGACGAGAAGCCTGAATTCCCAAGGCATTTCTCAAAGGAGGGTTTGGATTTCTTGAGCAGGTGCTTCGAGAGAGACTCATCAGAGAGGTGGACATGTGAGGAGTTACTTAGGCATCCATTTGTGTCAAGGGACTCATCAATGCCGTCACGTTCTTCCCAGAAGAAGATCTATGCTTGCTCACCAGCTAGTGTGTTGGGGATTCAGAATTTTGAGGATACTTATGATTTGGATGAACCAGAAAGTCCAGAGGAGGATAATGATTTCTCTGTAAGTAACCCATTCACATGGTGCAAAGTTGGAAGAAAAGGGACTGGAATGTTATGGCAAGGGGAAGACAGTGGATTAGGGTCACCAGAGAAATGGATTACTTTGCCCACTGCCGCTTCGCTTCCCGAGGTTTAA 1143 0.4514 MAGFSRSVYPKLGEWVKGKLVGSGSFGTVHLAMSKSTGGLFVVKSAHTETEAGFRVLENEVKILETLESSPYIVQCLGSERDGGNLNVLMEYMAGGSLADVAEEFGGSLPEEVVRVYTKEILQGLIHLHNNGIVHCDLKCKNVLLGSSGNIKLADFGCAKRVKDLKNDGDLVKKKKKKKNSLQSVTGTPLWMAPEVLKNEELGFAADIWSLGCSVIEMATGRPPWSASNDDALISNPMAALLKIACGDEKPEFPRHFSKEGLDFLSRCFERDSSERWTCEELLRHPFVSRDSSMPSRSSQKKIYACSPASVLGIQNFEDTYDLDEPESPEEDNDFSVSNPFTWCKVGRKGTGMLWQGEDSGLGSPEKWITLPTAASLPEV 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0035 380 SMART serkin_6 15 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0035 380 Pfam Protein kinase domain 17 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0035 380 SUPERFAMILY Protein kinase-like (PK-like) 13 312 IPR011009 -
Bisa07g0035 380 ProSiteProfiles Protein kinase domain profile. 15 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0035 380 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Bisa07g0035 380 Gene3D Transferase(Phosphotransferase) domain 1 9 333 - -
Bisa07g0035 380 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 14 310 - -
Bisa07g0035 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Bisa07g0035 380 CDD STKc_MAPKKK 14 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0035 Bisa-ChrBisa07 763075 766338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0035 4 343 MAP Kinase Kinase Kinase AT5G55090 41.499 1.84e-73 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bisa07g0035 Pkinase 6.5e-66 CL0016