Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0014 ATGAAGAACAATATGGGTGGGAAGGAGGAAAAGAGGGACCTGGAGATAGAAGGGGGTCCGGCGATGATGATGGAGAATGATGAGAGGGAAAACATATCAGACGACGTCTTTTCGAAACTCCTCAAAGAGCCCTTGCTTGTCAAGGGCAATAGGAAGAACACCACCTCCCAGCTCGCCATTGTTGGAGCCAATATCTGCCCAATTGAAAGTCTCGACTACGAGATCATTGAGAATGATGTTTTTATGCAAGATTGGAGGTCTAGAACAAAGGTTGAGATATGCCAGTATGTTGTCCTTAAATGGACACTTGCACTTCTCATTGGTTTAGGTACAGGGATTGTTGGTTTCTTCAATAACCTCGCTGTTGAGAATATTGCCGGTTTCAAGCTTTTACTTACCAACAATCTCATGCTCAAGGAAAAGTACTACGAGGCATTTGCAGCATTTGCTGGTTGTAACATGATTTTGGCCATTGCTGCTGCCACCCTCTGCGCCTACGTTGCCCCTGCAGCGGCTGGGTCTGGCATACCTGAGGTGAAGGCCTACCTCAATGGTATAGATGCTCATTCTATATTGGCTCCAAGTACACTCTTTGTAAAGATTTTTGGTTCAATTTTTGGAGTTGCTGCGGGGTTTGTTGTTGGTAAGGAAGGACCGATGGTACATACCGGTTCTTGCATAGCTAATTTGCTTGGACAAGGTGGTTCTAAAAAATATCGTTTGACATGGAAGTGGCTCAGATTCTTTAAAAATGATCGAGATCGAAGGGATTTGATCACTTGCGGTGCAGCTGCTGGGGTTGCTGCTGCCTTCCGTGCCCCGGTTGGTGGTGTCCTTTTTGCACTTGAAGAAGCAGCTTCATGGTGGAGGAGCGCTCTTTTGTGGCGGACTTTTTTTACGACAGCTGTAGTAGCAGTAGTGCTGAGAAGTTTCATGGAATTGTGCCGGGGTGGAAAATGTGGTCTTTTCGGGGAAGGTGGTTTGATAATGTTTGATGTTAATCAAGCAAAGCCTGCATATAGCACCCCTGACCTCCTGGTGGTTATATTTCTTGGGGCTGTCGGAGGCATTTTGGGAAGCCTATACAATTATCTTGTGGACAAGGTCCTTCGCACTTATGCCATAATAAATGAGAGAGGTCCAATATTCAAAATTATACTTGTTGCTATGATCTCCTTTTTGACCTCTTGTTGTTCATATGGCCTTCCATGGCTATCACAATGCATCCCTTGTCCTCCTAACTTGGAGGATCAGTGCCCTACCATAGGTCGCTCTGGACACTACAAGAATTATCAATGTCCACCTGGTTACTACAATGACCTGGCCTCTCTCTTTTTCACTACTAATGACGATGCCATTCGTAACCTCTTTACTTCTGGCTCTAACGACCCCTTTCAGCTCTATACTCTTCTGATTTTTTTTGTCGCCATATACTCCCTTGGAATCATCACTTACGGAATTGCTGTTCCGTCGGGGCTCTTCATTCCTGTCATACTTGCTGGGGCCTCATATGGGCGCCTTGCTGGGAGTCTTTTAAGTTCTTTCACAGTTCTTGATGTGGGGCTGTTTGCCCTCCTTGGAGCTGCATCGTTCCTTGGTGGTACCATGAGAATGACTGTTTCTATTTGTATCATACTTCTTGAACTCACTAATGACCTGTTGATGCTCCCATTGGTGATGCTGGTTCTCCTTATTTCAAAGACTGTGGCTGATTGCTTCAACAAAGGTGTATATGATCAGATTGTAAAATTGAAGGGGCTGCCTTATTTGGAAGCACATGCAGAACCATACATGAGGCATTTAGTTGCAAGTGATGTTGTTTCTGGCCCTTTAATTACATTTTCTGGGGTTGAAAAAGTGGGGAATATCGTTCATGCTTTGAGGATGACTAGGCACAATGGGTTTCCTGTGATCGATGAGCCTCCTTTCTCGGCTGCTCCTGAGTTGTGTGGGTTGGTTTTGAGGTCTCATTTGCTTGTGCTTCTTAAGAACAAGAAGTTTAGAAAACATAAGGTAATGACTGGGTCTACCATCATGAGGAACTTCAAGGCGCGTGATTTTGCAAAGCCGGGATTAGGCAAGGGCCTAAAGCTTGAGGATCTAGACATTTCAGAGGAGGAGATGGAAATGTATGTTGATCTCCATCCAATCACTAATTCTTCCCCCTATACAGTAGTGGAATCCATGTCTCTAGCGAAAGCTGCAGTTCTTTTCCGGGAGCTCGGCCTCAGGCACTTGTTGGTGGTTCCAAAGACACCAGGAAGGCCTCCCATAGTTGGGATCTTGACAAGGCATGACTTCATGCCAGAGCATATTTTGGGACTATACCCTCACCTGGACCCCCACAAGGAAGCTCTGTAG 2361 0.4549 MKNNMGGKEEKRDLEIEGGPAMMMENDERENISDDVFSKLLKEPLLVKGNRKNTTSQLAIVGANICPIESLDYEIIENDVFMQDWRSRTKVEICQYVVLKWTLALLIGLGTGIVGFFNNLAVENIAGFKLLLTNNLMLKEKYYEAFAAFAGCNMILAIAAATLCAYVAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGSCIANLLGQGGSKKYRLTWKWLRFFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRSFMELCRGGKCGLFGEGGLIMFDVNQAKPAYSTPDLLVVIFLGAVGGILGSLYNYLVDKVLRTYAIINERGPIFKIILVAMISFLTSCCSYGLPWLSQCIPCPPNLEDQCPTIGRSGHYKNYQCPPGYYNDLASLFFTTNDDAIRNLFTSGSNDPFQLYTLLIFFVAIYSLGIITYGIAVPSGLFIPVILAGASYGRLAGSLLSSFTVLDVGLFALLGAASFLGGTMRMTVSICIILLELTNDLLMLPLVMLVLLISKTVADCFNKGVYDQIVKLKGLPYLEAHAEPYMRHLVASDVVSGPLITFSGVEKVGNIVHALRMTRHNGFPVIDEPPFSAAPELCGLVLRSHLLVLLKNKKFRKHKVMTGSTIMRNFKARDFAKPGLGKGLKLEDLDISEEEMEMYVDLHPITNSSPYTVVESMSLAKAAVLFRELGLRHLLVVPKTPGRPPIVGILTRHDFMPEHILGLYPHLDPHKEAL 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0014 786 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 48 774 - -
Bisa07g0014 786 Gene3D Clc chloride channel 92 590 - -
Bisa07g0014 786 PRINTS Plant CLC chloride channel signature 317 324 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa07g0014 786 PRINTS Plant CLC chloride channel signature 441 457 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa07g0014 786 PRINTS Plant CLC chloride channel signature 285 293 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa07g0014 786 PRINTS Plant CLC chloride channel signature 74 82 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa07g0014 786 PRINTS Plant CLC chloride channel signature 299 309 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa07g0014 786 Gene3D - 591 773 IPR046342 -
Bisa07g0014 786 CDD CBS_pair_voltage-gated_CLC_euk_bac 603 770 - -
Bisa07g0014 786 Pfam Voltage gated chloride channel 157 571 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g0014 786 SMART cbs_1 610 663 IPR000644 -
Bisa07g0014 786 SMART cbs_1 721 772 IPR000644 -
Bisa07g0014 786 FunFam Chloride channel ClC3 92 407 - -
Bisa07g0014 786 ProSiteProfiles CBS domain profile. 717 781 IPR000644 -
Bisa07g0014 786 SUPERFAMILY CBS-domain pair 594 768 IPR046342 -
Bisa07g0014 786 CDD ClC_6_like 69 590 - -
Bisa07g0014 786 PRINTS Chloride channel signature 577 591 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g0014 786 PRINTS Chloride channel signature 169 186 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g0014 786 PRINTS Chloride channel signature 264 283 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g0014 786 PRINTS Chloride channel signature 521 537 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g0014 786 PRINTS Chloride channel signature 539 558 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g0014 786 PRINTS Chloride channel signature 200 219 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g0014 786 PRINTS Chloride channel signature 489 509 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa07g0014 786 Pfam CBS domain 719 767 IPR000644 -
Bisa07g0014 786 SUPERFAMILY Clc chloride channel 77 593 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0014 Bisa-ChrBisa07 448139 455439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0014 10 783 Ion Channels AT5G49890 78.065 0.0 1202