Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0011 ATGGGTTGCATATGCTCGAAAGGGACATCTTCAAATGAGTACGTTCCTGAGAACCATGTCAAAGACAAAGATACCAAGGCAAATAGAACCTCAAAACATTTGAGTACCAGAGAGAAGGTCGCAATAGAGGCTGATGGTGGTGGTAATGATGCTACTGCCAGGTTGATATCTAATCCATCTCGGGATGAAACTACAGGCTCCACTCCCATTTCATCAGATGAGGGGGAGAAGAATAGGGACACTATTGCAAAGCCTGCAAAACAACTGGTTCAGATGGCCTCGACCATGGGAATTGGAAGTGGAGGGCAAGGACAACCTAGGGTGACCAAGATAGTTAGTCTAACTAAAGGGGAAAGAGGAGCTCAAGTTCTTGCTGGCTGGCCTTCTTGGCTTACTGCAGTTGCGGGGGAAGCCATTAATGGTTGGACACCTCGCAGAGCAGACTCATATGAGAAGTTGGAGAAAATTGGGCAAGGAACTTACAGCAGTGTTTACAGAGCCCGTGATATTGAAACAAATAAAATTGTTGCATTGAAGAAGGTTCGATTTGCTAATATGGATCCAGAAAGTGTTCGTTTTATGGCAAGAGAAATTATTGTACTGCAAAGGCTTGATCATCCAAATGTCATGAAGCTTGAAGGCATCATTACTTCAAGGGTCTCTGGTAGCTTGTATCTTGTCTTTGAATATATGGAACATGATCTTGCAGGGCTTTTAGCAATACCTGGCATCAAGTTCACTGAAGCACAGATTAAATGTTACATGCAACAGCTGCTTCGTGGTATTGAGTATTGCCATAGTCATGGAGTTCTGCACCGTGACATCAAGGGTTCAAATCTTCTGATTGACAAGAATGGCAATCTAAAGATCGGTGATTTTGGGCTAGCAACTTTTTTTCAGCCGTCTAAAGGGAATGTTTTAACTAGTCGTGTGGTAACCTTGTGGTACCGACCACCTGAACTTCTACTGGGAGCCACAGATTATGGAGTTGCTGTGGACTTGTGGAGTGCTGGTTGCATCCTTGCAGAGTTGTTTGCAGGGAAGCCCATAATGCCTGGACGAACAGAGGTGGAGCAACTTCATAAAATCTTCAAACTCTGTGGATCACCTTCTGAAGAATACTGGAAGAAGTCAAAGCTACCACATGCAACAATTTTCAAGCCTCAACATCCTTACAAACGTGTTGTTGCTGAAACATTTAAGGATTTTCCTCCATCGGCACTAAGCCTTCTGGAGGACCTTCTTGCTATAGAACCCAATGATCGTGGAACAGCTTCTTCAGCACTGCAGAGTGAGTTCTTCAGAACAAAGCCGCTTGCTTGTGATCCATCAACTTTGCCAAAGTACCCACCAAGTAAGGAATTTGATGCCAAGTTTCGACAAGAAGAAGCCAGAAGGCGAAGAGCTGCAAGTAATAAAAGAAATGAAGAGGAAGTGGTTAGGAAGGATTTCAAAGAATCTAAAGCTGTGCCAGCACCTGATGCTAATGCCGAGTTGCGGGCATCAATTGAGAAGAGACAAGGACAGGCTAACCCTAAATGCATCAGTGAGAAGTACAATCCTGATGAGGATAGTGGTTCTGGCTTCCCTATTGAACCTTCTAGGTCGGGACCATTCAATGCCTTCTCTCATTCTGGCCAGTCAATGCATCCAAGTTCATATGGATCTTCACGCAATATGATTTTGAACAAGGAAGATTCTCTTGCCGGCCATGGCCATATCTACAGTTCAGGAAATCCTGCTGAGTTGAGAAAACAGAGATCATACTTGCATGATAGCGCTGCAAAATTGTCAAGATTTGCTAATTCAGTTGCCACAGGTGGTGATTCAAAGCTTGATATGAGTGGAGATGCTAGCGTGAATTCACTGTGGCCAGAGGATTGCTTCGGCTCTAGATATGGCCATCTAGCTGATGGTGAATCCAACCAATTGCTGAAGTCTTCACACAAGGACATCTATCTTTCTGCGAAGGAGCCTGCCATGGCCTATGCTCCAAAAAATGGCCACATCCACTATTCAGGACCAGTGGTCCTTCGAGGGGAAAATCTTGATGAAATGCTAAAGGAGCATGAAAGGCAAATCCAACAGGTGTTCCGCAAGGCACGCTTGGATAAGGTCAAGATAAATAAATCTGACAATGAGAATGGCCAAACTGAATCACTGCTTCACCATGTTAGAAGAAGATGGATACTGTCCAGGGTAAATGATATCCATGGCGAACTCATCCTTTTCCTTTTTGCGGAAAATGCTTGCTACCTGCTCCTCCCCTTCCTCCTGGTTTTGACCATCATTCTTGAGCTTCAGAGGCGTAGTCAGTGGAGAAAGTACCAGGACCTGAGTGACTTGGAGAGATGCGTAGAAGGGATCGAAGGCGTTCGAGCCGTTCAGATTCAAGAATATGCTGGTGGAGATGCTGTTGAACTTGACGGCGAGCTCCTTATTCCTGAGTGGACAATAAATAGTGGTTCGGCCACCATAGTGCGGTTGGCGCTCTCATCCCTCCGCATTGCCATCGCCTTCCTTCCTAATGCTCCTAATGATGTTCGATAG 2550 0.4506 MGCICSKGTSSNEYVPENHVKDKDTKANRTSKHLSTREKVAIEADGGGNDATARLISNPSRDETTGSTPISSDEGEKNRDTIAKPAKQLVQMASTMGIGSGGQGQPRVTKIVSLTKGERGAQVLAGWPSWLTAVAGEAINGWTPRRADSYEKLEKIGQGTYSSVYRARDIETNKIVALKKVRFANMDPESVRFMAREIIVLQRLDHPNVMKLEGIITSRVSGSLYLVFEYMEHDLAGLLAIPGIKFTEAQIKCYMQQLLRGIEYCHSHGVLHRDIKGSNLLIDKNGNLKIGDFGLATFFQPSKGNVLTSRVVTLWYRPPELLLGATDYGVAVDLWSAGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRVVAETFKDFPPSALSLLEDLLAIEPNDRGTASSALQSEFFRTKPLACDPSTLPKYPPSKEFDAKFRQEEARRRRAASNKRNEEEVVRKDFKESKAVPAPDANAELRASIEKRQGQANPKCISEKYNPDEDSGSGFPIEPSRSGPFNAFSHSGQSMHPSSYGSSRNMILNKEDSLAGHGHIYSSGNPAELRKQRSYLHDSAAKLSRFANSVATGGDSKLDMSGDASVNSLWPEDCFGSRYGHLADGESNQLLKSSHKDIYLSAKEPAMAYAPKNGHIHYSGPVVLRGENLDEMLKEHERQIQQVFRKARLDKVKINKSDNENGQTESLLHHVRRRWILSRVNDIHGELILFLFAENACYLLLPFLLVLTIILELQRRSQWRKYQDLSDLERCVEGIEGVRAVQIQEYAGGDAVELDGELLIPEWTINSGSATIVRLALSSLRIAIAFLPNAPNDVR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0011 849 MobiDBLite consensus disorder prediction 1 15 - -
Bisa07g0011 849 ProSiteProfiles Protein kinase domain profile. 150 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0011 849 FunFam probable serine/threonine-protein kinase At1g54610 233 474 - -
Bisa07g0011 849 Gene3D Phosphorylase Kinase; domain 1 144 237 - -
Bisa07g0011 849 MobiDBLite consensus disorder prediction 445 530 - -
Bisa07g0011 849 CDD STKc_CDK9_like 150 434 - -
Bisa07g0011 849 MobiDBLite consensus disorder prediction 453 489 - -
Bisa07g0011 849 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524
Bisa07g0011 849 MobiDBLite consensus disorder prediction 16 44 - -
Bisa07g0011 849 Coils Coil 680 700 - -
Bisa07g0011 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Bisa07g0011 849 MobiDBLite consensus disorder prediction 53 72 - -
Bisa07g0011 849 Pfam Protein kinase domain 150 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0011 849 MobiDBLite consensus disorder prediction 1 79 - -
Bisa07g0011 849 Gene3D Transferase(Phosphotransferase) domain 1 238 474 - -
Bisa07g0011 849 SUPERFAMILY Protein kinase-like (PK-like) 143 440 IPR011009 -
Bisa07g0011 849 PANTHER CELL DIVISION PROTEIN KINASE 148 440 - -
Bisa07g0011 849 SMART serkin_6 150 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0011 849 FunFam probable serine/threonine-protein kinase At1g54610 137 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0011 Bisa-ChrBisa07 359706 367541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0011 142 579 Core Cell Cycle Gene Families AT5G10270 44.592 4.11e-116 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa07g0011 Pkinase 7.5e-72 CL0016