Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0009 ATGCCCACGCCTTATGTTCGGGCAGTTATGATGTCGGCCCAGAAAAAGTCGCAGCTTGTGCTTCGGAAGAGCGCCGGCACTATCTTTGATAAGAGCGGCACGTCTTTCTGTGAAGCCATGGCGCTGATCCTGCATGCAGGGAAAACAAACAAAAATGCTTGGAAGACTCTTATTGCAGCAGAGTACAGTGGTGTGCAAGTTGAATTGGCCCCAAATTTTGAGATGAATGTCTCTAATAAAGCTCCTGAGTTTCTCACGATGAACCCTATTGGCAAGGTTCCTGTGTTGGAAACACTGGATGGCCCCATATTTGAGAGTAATGCTATTGCTCGTTATGTTGCTCGCTTGAAGGGTGACAATGTGTTGTATGGATCTTCTCCAATTGATTATGCCCACATTGAACAGTGGATTGATTTTTCATCATTGGAGATTGATGCTAATATTATCACCTGGTACAGACCAAGACTGGGACGAGCTATATACCTTCCTCCCGTTGAAGAGGCTGCAATCACTGCATTGAAGAGGGCGTTGGGTGCGTTGAACACTCACCTTGCCTCTAATACTTACCTGGTTGGGCATTCCGTGACCCTAGCTGACATTATTATGACATGCAATTTGTTCTTGGGTTTCACTCAGCTCATGACTAAGAGCTTCACTTCGGAGTTTCCTCATGTTGAGAGGTACTTCTGGACTTTGGTCAATCAACCAAAATTCCAAAAGATTTTAGGTGAGGTCAAGCAAGCTGAAGCTATTCTCCCTGTTCAATCTGCTCAGAAGCCCAAAGAATCTGCCAAACCCAAGGCAAAGGACCAACCAAAGAAAGAGGCTAAGAAAGAGGTCCAACAAGTGCAAGAAAGGCCCAAAGTTGAGGAAGAAGAGGAGGCACCCAAGCCTAAACCCAAGAATCCTCTTGATCTTCTTCCTCCAAGTAAGATGATATTGGATGAGTGGAAAAGACTCTATTCAAATACCAAGACCAACTTCCGTGAGGTCGCAATCAAAGGATTTTGGGATATGTATGATCCTGATGGTTACTCTCTCTGGTTTTGTGAGTACAAATACAATGAAGAGAATACTGTTTCCTTTGTGACATTGAACAAGGTTAGTGGCTTTCTTCAGAGGATGGATCTGGCTCGCAAGTATGCATTTGGCAAAATGCTTGTTATTGGATCTGAGCCACCATTTAAGGTGAAGGGGTTGTGGCTATTCCGTGGGCAAGAAATCCCACAATTTGTGATTGATGAATGTTATGACATGGAGCTTTATGAATGGACTAAAGCTGACATCTCAGATGAAGCTCAAAAGGAGCGTGTCAATCAGATGATTGAAGATTGCGAGCCATTTGAGGGTCAGCCTCTCTTGGATGCCAAATGCTTTAAGTGA 1383 0.4425 MPTPYVRAVMMSAQKKSQLVLRKSAGTIFDKSGTSFCEAMALILHAGKTNKNAWKTLIAAEYSGVQVELAPNFEMNVSNKAPEFLTMNPIGKVPVLETLDGPIFESNAIARYVARLKGDNVLYGSSPIDYAHIEQWIDFSSLEIDANIITWYRPRLGRAIYLPPVEEAAITALKRALGALNTHLASNTYLVGHSVTLADIIMTCNLFLGFTQLMTKSFTSEFPHVERYFWTLVNQPKFQKILGEVKQAEAILPVQSAQKPKESAKPKAKDQPKKEAKKEVQQVQERPKVEEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPDGYSLWFCEYKYNEENTVSFVTLNKVSGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKADISDEAQKERVNQMIEDCEPFEGQPLLDAKCFK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0009 460 SFLD Glutathione Transferase (cytosolic) 44 229 IPR040079 -
Bisa07g0009 460 Pfam Glutathione S-transferase, N-terminal domain 41 115 IPR004045 -
Bisa07g0009 460 Pfam Glutathione S-transferase, C-terminal domain 167 236 IPR004046 -
Bisa07g0009 460 SUPERFAMILY eEF1-gamma domain 300 460 IPR036433 GO:0003746|GO:0006414
Bisa07g0009 460 Gene3D Glutaredoxin 38 113 - -
Bisa07g0009 460 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 300 460 IPR001662 GO:0003746|GO:0006414
Bisa07g0009 460 CDD GST_C_EF1Bgamma_like 129 249 - -
Bisa07g0009 460 Pfam Elongation factor 1 gamma, conserved domain 299 407 IPR001662 GO:0003746|GO:0006414
Bisa07g0009 460 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 300 460 IPR036433 GO:0003746|GO:0006414
Bisa07g0009 460 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 40 121 IPR004045 -
Bisa07g0009 460 FunFam Elongation factor 1-gamma 1 300 460 - -
Bisa07g0009 460 SUPERFAMILY GST C-terminal domain-like 112 251 IPR036282 -
Bisa07g0009 460 CDD GST_N_EF1Bgamma 44 116 - -
Bisa07g0009 460 Gene3D - 119 256 - -
Bisa07g0009 460 MobiDBLite consensus disorder prediction 256 307 - -
Bisa07g0009 460 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 126 254 IPR010987 -
Bisa07g0009 460 Coils Coil 273 293 - -
Bisa07g0009 460 FunFam Elongation factor 1 gamma 119 255 - -
Bisa07g0009 460 SUPERFAMILY Thioredoxin-like 38 123 IPR036249 -
Bisa07g0009 460 SMART EF1G_2 299 407 IPR001662 GO:0003746|GO:0006414
Bisa07g0009 460 SFLD Main (cytGST) 44 229 - -
Bisa07g0009 460 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 40 460 IPR044628 GO:0004364
Bisa07g0009 460 FunFam Elongation factor 1B gamma 40 113 - -
Bisa07g0009 460 MobiDBLite consensus disorder prediction 262 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0009 Bisa-ChrBisa07 284160 287665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0009 40 460 Eukaryotic Initiation Factors Gene Family AT1G57720 73.872 0.0 617