Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2240 ATGGCCCTCATGGGCGAGATCGACGTCCAATCCCTCGCCGCCATGCCCCATCTCCGCTCCATCAGCTTGATGAACAATGCCTTTGTCGGTCCCATCCCCAACCTCAAGCTCCTCAACAACCTCAAGTCCATCTACTTGTCCTACAACCATTTCTCCGGGGTCATCCCCGACGATCTTTTTGCGGGCATGAATAGGTTGAAGAAGGTTTATTTGGGCAACAACGACTTCACTGGCAGAATCCCTTCCTCCCTTGCTGCCCTCCCCAACCTCCTCGTCCTCAGGCTCGACAACAACAAGTTCAGAGGCACCATCCCTGATTTTCTAACTAAAAAGTTGAAGAGGATCGACTTATCTAACAATGAATTAGAGGGGCCCATCCCCTCCACTCTCTCCTCCTTCAACCCCCACGCCTTCACGGGCTATAAGTCAAACATTTTCATGATTCTGCTTATCGTGGCACTGGTATTACTGGTTGTCGTGGTTGTGGTTGCGTCAATCGTGATAGCCCGCTTGAGGTCTGCCCAGAAAAAGCAGCAACCCTCGGACGACGCTTCTGTGTCTGCGTTCCGAAGTCAAGCGTCCACTAAGTACGTTCCTGCTGTTTACGCGACAACCAAAAGCGTAGGGGAATATGAGAACAAGCAGGCGATGGCTGAGCATCATAATCAGGGACAATATTCAAAGAAGGGGGAAGCAGGGAAGTTGACATTCGTGAGGGATGGCCACCAGACGTTTGATCTTCCAGACTTGCTCAAAGCGTCTGCTGAAATTCTGGGGAGCGCATCCTTTGGGTCTTCGTACAAGGCGGTGATGAAGGACGACATATCCGTGGTTGTCAAGAGGTACAAGCATATGAACAACCTCAACAGGGAGGAGTTCTCTGACTACATGGCAAAGCTTGGAAAGCTCTCCAATCCAAATATTCTCCCTCTTGTCGCCTATTATTACAGGAAAGAAGAGAAGCTCTTGGTCTCTGGCTTTGTTCAAAGGGGTTGCCTGGCCAGCCATCTTCATGGTAATCATAACTCGGAACAGGGGCTTGATTGGCCAACCCGGCTGAAAATCGTAAAAGGCGTAGCCAGGGGTTTGTCATCCCTCTACAATGCACTGCCGAACCTTGTCGTGCCTCATGGTCATCTGAAATCTTCCAACGTGCTGCTGGATGAATCGTTTGAGCCTTTACTCACGGATTTTGGACTTATTTCTGTGATCAACCACGATCATGCCCAACAGATCATGATGCCTTACAAATCCCCCGAGTATGCACAACTCGGCCGCATTACCAAGAAGACGGATGTGTGGAGTTTCGGCATTGTTATACTGGAGATCTTAACTGGAAAATTCCCGGAGAACTATCTCACTCTCAGGCATGATCCTAGTTCAGACATTGCCAGTTGGGTGAACACGATGATCACCGAGAAGCGCACTGGTGAAGTGTTCGAAGCTGAGATGGGAGGGGTCGACAATAGCAAAGGCGAATTGCTCAAACTCTTGAAGATTGGCTTGAGTTGTTGTGAGGAGAACGTGGAAAGGAGACTGGACATCAAGGAGGCTCTCCAGCAGATCGAAGAGTTGAAAGATTCTGAGAGTGATGCAAATTTTTCTTTACTTGTCACTAACGAACGGGAAGCTTTTAAAACTATGTGA 1647 0.4912 MALMGEIDVQSLAAMPHLRSISLMNNAFVGPIPNLKLLNNLKSIYLSYNHFSGVIPDDLFAGMNRLKKVYLGNNDFTGRIPSSLAALPNLLVLRLDNNKFRGTIPDFLTKKLKRIDLSNNELEGPIPSTLSSFNPHAFTGYKSNIFMILLIVALVLLVVVVVVASIVIARLRSAQKKQQPSDDASVSAFRSQASTKYVPAVYATTKSVGEYENKQAMAEHHNQGQYSKKGEAGKLTFVRDGHQTFDLPDLLKASAEILGSASFGSSYKAVMKDDISVVVKRYKHMNNLNREEFSDYMAKLGKLSNPNILPLVAYYYRKEEKLLVSGFVQRGCLASHLHGNHNSEQGLDWPTRLKIVKGVARGLSSLYNALPNLVVPHGHLKSSNVLLDESFEPLLTDFGLISVINHDHAQQIMMPYKSPEYAQLGRITKKTDVWSFGIVILEILTGKFPENYLTLRHDPSSDIASWVNTMITEKRTGEVFEAEMGGVDNSKGELLKLLKIGLSCCEENVERRLDIKEALQQIEELKDSESDANFSLLVTNEREAFKTM 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2240 548 SUPERFAMILY Protein kinase-like (PK-like) 256 526 IPR011009 -
Bisa06g2240 548 Pfam Protein tyrosine and serine/threonine kinase 256 519 IPR001245 GO:0004672|GO:0006468
Bisa06g2240 548 Gene3D Transferase(Phosphotransferase) domain 1 328 536 - -
Bisa06g2240 548 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 529 IPR046959 -
Bisa06g2240 548 FunFam Pollen receptor-like kinase 1 328 536 - -
Bisa06g2240 548 Gene3D Phosphorylase Kinase; domain 1 217 327 - -
Bisa06g2240 548 Pfam Leucine Rich Repeat 111 133 IPR001611 GO:0005515
Bisa06g2240 548 Coils Coil 508 528 - -
Bisa06g2240 548 Gene3D Ribonuclease Inhibitor 1 139 IPR032675 -
Bisa06g2240 548 ProSiteProfiles Protein kinase domain profile. 252 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g2240 548 SUPERFAMILY L domain-like 7 136 - -
Bisa06g2240 548 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 9 104 - -
Bisa06g2240 548 Pfam Leucine rich repeat 40 100 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2240 Bisa-ChrBisa06 66794694 66796692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2240 1 531 Receptor kinase-like Gene Family AT5G35390 46.643 1.08e-165 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa06g2240 PK_Tyr_Ser-Thr 1.9e-28 CL0016