Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2216 ATGATGCTGTCAGCGATTGTCTTCGGCTCCGTGTTTGCTTCACCAGAGCACACAGACATCGGCTCATTCAAGATGGGTGAGGAGGTTAAGGCGGCTACTGTTCCAGAGTCTGTGTTGAAGAAGCAGAAGAGGGAAGAGGAATGGGCATTGGCCAAAAGACAGGAGTCTGAAGCAGCAAAGAAGAAGAGAGCCGAGAACCGTAAGCTGATCTACAACAGAGCCAAGCAGTATGCCAAGGAGTATGAGGAGCATGAAAAGGAGTTAATTCAATTGAAACGTGAGGCAAAGCTGAAGGGTGGGTTTTATGTTGATCCAGAGGCTAAACTCTTATTCATTATTCGCATTCGTGGTATTAATGCCATGCATCCAAAGACAAGAAAGATCTTGCAGCTTTTGCGATTGAGACAGATATTCAATGGTGTATTTATTAAAGTTAACAAGGCCACAATGAACATGCTGCACAGGGTTGAACCTTATGTGACATACGGATACCCAAATCTGAAGAGTGTAAGAGAACTTATTTACAAGAGGGGCTATGGTAAGCTTGACAAGCAGAGAGTCGCTTTAACTGACAACAGCATCATTGAGCAGGCGCTGGGCAAGTATGGAATCATTTGCATTGAAGATCTCATCCATGAGATTATGACAGTTGGACGCCATTTTAAGGAGGCCAACAACTTTCTTTGGCCATTTAAGCTTAAAGCTCCTTTGCGTGGACTAAAGAAAAAGAGAAACCACTATGTTGAAGGAGGTGATGCTGGAAACCGGGAGAATTACATCAATGAGCTCATCAGGAGAATGAACTAG 807 0.4387 MMLSAIVFGSVFASPEHTDIGSFKMGEEVKAATVPESVLKKQKREEEWALAKRQESEAAKKKRAENRKLIYNRAKQYAKEYEEHEKELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFIKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRVALTDNSIIEQALGKYGIICIEDLIHEIMTVGRHFKEANNFLWPFKLKAPLRGLKKKRNHYVEGGDAGNRENYINELIRRMN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2216 268 NCBIfam 60S ribosomal protein uL30 35 268 IPR005998 GO:0000463|GO:0003735|GO:0022625
Bisa06g2216 268 Coils Coil 67 98 - -
Bisa06g2216 268 ProSitePatterns Ribosomal protein L30 signature. 128 160 IPR018038 -
Bisa06g2216 268 Gene3D - 214 268 IPR036919 -
Bisa06g2216 268 Gene3D - 109 213 IPR036919 -
Bisa06g2216 268 Pfam Ribosomal L30 N-terminal domain 34 105 IPR012988 -
Bisa06g2216 268 CDD Ribosomal_L7_archeal_euk 109 268 IPR035808 -
Bisa06g2216 268 FunFam 60S ribosomal protein L7 214 268 - -
Bisa06g2216 268 SUPERFAMILY Ribosomal protein L30p/L7e 109 268 IPR036919 -
Bisa06g2216 268 FunFam 60S ribosomal protein L7 109 213 - -
Bisa06g2216 268 Pfam Ribosomal protein L30p/L7e 110 160 IPR016082 -
Bisa06g2216 268 PANTHER 60S RIBOSOMAL PROTEIN L7 32 268 IPR039699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2216 Bisa-ChrBisa06 66520921 66524126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2216 25 268 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 83.607 7.83e-153 424