Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2213 ATGTCGAATTCCACTAGATGTGCTGCTTGCAAATATTTTAGGAGAAGATGCTTACAAGATTGCGTGCTGGCACCCTATTTTCCCTTAACCAATCCAGAGAGATTTGCTACTGCTCATAAGATCTTTGGTGCCAGCAATATTACCAAAATGCTACAGCAACTTCCAGTGCATTTACGAGCTGAGGCGGCGGATTGCATGTGTCTGGAAGCGAGTTTACGTGCTGAAGATCCAGTGTATGGTTGCATTCGAATAATCTCTCAACTGCAACAACAGATTATCCAGACACAAAACGACATAATAAAGATCAAGGGTGAAATAACGTTTTATGAAGCACAGAGACAACACTAA 348 0.4167 MSNSTRCAACKYFRRRCLQDCVLAPYFPLTNPERFATAHKIFGASNITKMLQQLPVHLRAEAADCMCLEASLRAEDPVYGCIRIISQLQQQIIQTQNDIIKIKGEITFYEAQRQH 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2213 115 Coils Coil 85 105 - -
Bisa06g2213 115 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 112 - -
Bisa06g2213 115 Pfam Lateral organ boundaries (LOB) domain 6 100 IPR004883 -
Bisa06g2213 115 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2213 Bisa-ChrBisa06 66487871 66488395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2213 3 106 AS2 family AT3G26660 56.731 3.74e-43 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa06g2213 LOB 4.8e-36 No_clan