Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2202 ATGAGGCATCTCACGATGCTTCTTCTTCTTCTTCCATGTTTTTCTTCCTTCTTATGTTCTGTTTCTGCTTTGAGCTCTGATGGGGTGACTCTATTGTCACTGTTGAGGCATTGGACTTTTGTGCCTCCTCCCATAAACTCCAGCTGGAACCCTTCTGGTTCCACCCCTTGCTCATGGGTAGGAATCCAATGCGACCATGCCCACAATGTAATCTCCCTCAACCTCACTGAGTATGGGATTGTTGGTCAATTAGGACCTGAGATTGGACTTCTGAGTCACCTGCAAAGCTTTGTGTTGATGACTAATGGCTTCTCTGGAAAAATGCCTCCTGAGTTAGGAAACTGTAGTCTGCTAGAGTACTTAGACCTCACTGACAACAACTTTACTGGACAAATACCTGATAGCTTCAAAAACTTGCAAAAGTTAACGTATATCAGCCTTTCTACTAATCTACTCGCAGGTCAAATTCCAGAATTTTTCACTCAAATCCCTCACCTGCAACTTGTTGACATGTCTTATAACACACTCAGTGGTCCAATCCCTTCAAGTATAGGAAACATGAGTGAGCTTTTGAAGCTGTATCTGCAAAGTAACGAGTTGTCAGGGGAAATTCCTTCATCAATTGGGAATTGCAGTAAATTGCAGGAATTGTTCTTGGATAGGAATCAGTTTCAGGGAACCCTTCCTGAGACACTTAACAGTCTTCATGACGTTGTTTATTTAGACTTCAGTGATAATGATCTTAGGGGTTCTGTTCCATTGGGTTCTGGCAGATGTGAAAATTTATATTTCTTGGATCTGTCATATAACGTATTCAGTGGAGGCATTCCTTCAGGCTTGGGGAAATGTACTGGTTTAACACAATTTGCTGCTGTTAACAGTAGCTTAACCGGCAGTATTCCATCGTCCATCGGTCTGCTTCGTAAGCTTTCGATTCTACACCTTTCTGTGAACGGCTTGTCTGGGAAAATACCTCCAGAAATTGGCAATTGTAAGTCTTTGACGGAGTTACAATTGGATGCCAATCAACTCGAGGGAGAAATTCCCAGTGAGCTGGGAAATTTGAGGGAATTGCGGGATCTTGAATTGTTTTCCAACCATTTGACCGGTGAAATTCCTCTTAGTGTCTGGAAGATTCAAAGTCTTGAGCATATCCTTGTGTACAATAATAACCTTTCTGGGGAACTGCCTTTAGAGATGACAGAGCTCAAGCACCTGAAGAATATCTCGTTATTTAACAACCACTTCTCTGGAGTGATACCTCAAACTTTGGGAATTAATAGCAGTTTAGTAGAGTTGGACTTCACAAATAATAAGTTCACCGGTAACATCCCGCCAAATCTTTGTTTTGGAAAGCAATTGAGTATCCTGAATTTGGGTGTTAATCAACTTCAAGGTAGCATACCTCCTGATGTAGGAAGGTGTACAACTCTTAGAAGGTTGATTCTAAAAGAAAATAACTTTACAGGGCCGTTTCCTTATTTCGAAAGTAATCCAAATCTCATGTTCATGAATATCAGCAGAAACAATATCAATGGCACTATCCCACCGAGTTTGGGAAACTGCACAAGTCTCACTGATTTAATTTTGTCGCATAACAACTTCTCAGGGCATATACCGTCAGAGCTAGGAAACGTCGTGAACCTCAAGACTTTGGTTCTTGCTCACAACAACTTAGAAGGTCCTTTGCCGCCTCAACTGTCAAAATGTACCAAAATGGACAAGTTTGCTGTGGGATTCAATTTCCTAAATGGTTCATTCCCATCAAGTTTGAGGAGCTGGACGGGGCTAACCACATTGATTCTAAGAGAGAATCATTTTAATGGCGGTATCCCAGATTTCTTATCAGATTTTAGCAAGCTTTCTGAGCTACAACTTGGTGGAAATAAGTTTGGAGGCAAAATTCCTGGATCAATTGGGGCATTGCGGAATCTGATGTATGGGTTGAACCTAAGTGCTAATGGGCTGATTGGTGAAATTCCTCTAGAGATTGGAAAATTGAAAAATCTGCAGAGTCTGGATATATCTCGAAACAATTTGACCGGAAGCATAGGTATTCTTGCTGAGCTTTATTCATTATTTCAAATTAATGTTTCATACAATTCCTTTAATGGTCCTGTACCAAAGACACTGATGAAGTGGCTTAATTCATCATCATTTTTGGGAAATCCTGGCCTGTGTGTCAGTTGTTCATCATCAAGTGGCATGGTTTGCAATAGAAGCAGCTATCCAAAGCCATGTGACAATGAATCAACCAACCAGAAAGGCCTTAGGAAAGTTAAAATTGCAATGATAGCAGTAGGATGCTCAATATTTTTTGTTTTTGTCCTACTGGGACTAGTTTATATGTTTGTCTGTGGCAAAAAGTCTAAGCAGGAATGTCAGATCTCTGCCAATGAAGGTCCTTCTTCACTGCTTAACAAAGTAATGGAAGCTACTGCAAACCTCAACGATCGATATATTATTGGTAGAGGAGCCCACGGAGTTGTTTATAGAGCTCCACTAGATCCAGCCCGGGTTTATGCTGTAAAGAAGCTTGCATTGACTGGGAACAAAGGCAGAAGCTTAAGCATGGTTAGAGAAATTCAAACCCTTGGAAAGATCAGGCATCGGAATCTTGTCAAATTGGAAGACTTTTGGTTGAGAAAGGATTTTGGTCTAATCATGTACAGGTACATGCCAAACGGAAGCCTTCATGATTTCTTGCATGAAAAGAATCCACCGCCATCCTTAGAGTGGAATGTCCGGTACAAGATCGCCATCGGAATTGCTCATGGATTATCATATCTCCATTATGACTGTGATCCTCCCATAGTACACCGCGACATCAAACCAAAAAACATACTTCTGGATTCTGATATGGAGCCTCACATTGCTGATTTCGGTATTGCCAGGCTTTTGGATCAGTCTTCTGCTTCAACACCATCTGTATCAGTTCCTGGCACTGTAGGTTATATTGCGCCAGAGAATGCATATACAACAGCAAAGAGTAGGGAATCTGATGTATACAGTTATGGGGTGGTTTTGCTCGAGCTGATAACCAGAAAGAAGGCGGTGGATCCATCATTTATGGAGGGGATTGATATAGCAGGTTGGGTCAGAAATCTCCGGGGACATACAGGAGATATTGAAGAAATTGTTGATCCAAGCCTTGCACAGGAGTTCTTGGATTCAAGTGTGCTTGAACAAGTGACCAAAGTGTTTTTGGTGGCTTTGAGATGTACTGAGAAGAATCCAAACATGAGACCCACAATGAGAGATGTTATCAGGCAATTAGAAGGTGCTAATCCCAGGACAAGAAGCAAAAAGCATCCAAGTTCAAACTCCTTAATGCGCATTTGA 3342 0.4141 MRHLTMLLLLLPCFSSFLCSVSALSSDGVTLLSLLRHWTFVPPPINSSWNPSGSTPCSWVGIQCDHAHNVISLNLTEYGIVGQLGPEIGLLSHLQSFVLMTNGFSGKMPPELGNCSLLEYLDLTDNNFTGQIPDSFKNLQKLTYISLSTNLLAGQIPEFFTQIPHLQLVDMSYNTLSGPIPSSIGNMSELLKLYLQSNELSGEIPSSIGNCSKLQELFLDRNQFQGTLPETLNSLHDVVYLDFSDNDLRGSVPLGSGRCENLYFLDLSYNVFSGGIPSGLGKCTGLTQFAAVNSSLTGSIPSSIGLLRKLSILHLSVNGLSGKIPPEIGNCKSLTELQLDANQLEGEIPSELGNLRELRDLELFSNHLTGEIPLSVWKIQSLEHILVYNNNLSGELPLEMTELKHLKNISLFNNHFSGVIPQTLGINSSLVELDFTNNKFTGNIPPNLCFGKQLSILNLGVNQLQGSIPPDVGRCTTLRRLILKENNFTGPFPYFESNPNLMFMNISRNNINGTIPPSLGNCTSLTDLILSHNNFSGHIPSELGNVVNLKTLVLAHNNLEGPLPPQLSKCTKMDKFAVGFNFLNGSFPSSLRSWTGLTTLILRENHFNGGIPDFLSDFSKLSELQLGGNKFGGKIPGSIGALRNLMYGLNLSANGLIGEIPLEIGKLKNLQSLDISRNNLTGSIGILAELYSLFQINVSYNSFNGPVPKTLMKWLNSSSFLGNPGLCVSCSSSSGMVCNRSSYPKPCDNESTNQKGLRKVKIAMIAVGCSIFFVFVLLGLVYMFVCGKKSKQECQISANEGPSSLLNKVMEATANLNDRYIIGRGAHGVVYRAPLDPARVYAVKKLALTGNKGRSLSMVREIQTLGKIRHRNLVKLEDFWLRKDFGLIMYRYMPNGSLHDFLHEKNPPPSLEWNVRYKIAIGIAHGLSYLHYDCDPPIVHRDIKPKNILLDSDMEPHIADFGIARLLDQSSASTPSVSVPGTVGYIAPENAYTTAKSRESDVYSYGVVLLELITRKKAVDPSFMEGIDIAGWVRNLRGHTGDIEEIVDPSLAQEFLDSSVLEQVTKVFLVALRCTEKNPNMRPTMRDVIRQLEGANPRTRSKKHPSSNSLMRI 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2202 1113 ProSiteProfiles Leucine-rich repeat profile. 669 691 IPR001611 GO:0005515
Bisa06g2202 1113 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Bisa06g2202 1113 ProSitePatterns Protein kinases ATP-binding region signature. 822 845 IPR017441 GO:0005524
Bisa06g2202 1113 Gene3D Phosphorylase Kinase; domain 1 786 892 - -
Bisa06g2202 1113 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Bisa06g2202 1113 Pfam Protein kinase domain 821 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g2202 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 938 950 IPR008271 GO:0004672|GO:0006468
Bisa06g2202 1113 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 23 177 - -
Bisa06g2202 1113 Gene3D Transferase(Phosphotransferase) domain 1 893 1111 - -
Bisa06g2202 1113 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 452 736 - -
Bisa06g2202 1113 FunFam Serine/threonine-protein kinase-like protein CCR4 893 1111 - -
Bisa06g2202 1113 Gene3D Ribonuclease Inhibitor 180 286 IPR032675 -
Bisa06g2202 1113 SMART serkin_6 816 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g2202 1113 SUPERFAMILY Protein kinase-like (PK-like) 804 1093 IPR011009 -
Bisa06g2202 1113 Gene3D Ribonuclease Inhibitor 500 742 IPR032675 -
Bisa06g2202 1113 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 462 1087 - -
Bisa06g2202 1113 SUPERFAMILY RNI-like 373 721 - -
Bisa06g2202 1113 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 783 892 - -
Bisa06g2202 1113 FunFam Leucine-rich repeat receptor-like protein kinase TDR 178 425 - -
Bisa06g2202 1113 Gene3D Ribonuclease Inhibitor 26 179 IPR032675 -
Bisa06g2202 1113 Gene3D Ribonuclease Inhibitor 287 352 IPR032675 -
Bisa06g2202 1113 Gene3D Ribonuclease Inhibitor 429 499 IPR032675 -
Bisa06g2202 1113 Gene3D Ribonuclease Inhibitor 353 428 IPR032675 -
Bisa06g2202 1113 SMART LRR_typ_2 546 570 IPR003591 -
Bisa06g2202 1113 SMART LRR_typ_2 187 211 IPR003591 -
Bisa06g2202 1113 SMART LRR_typ_2 667 689 IPR003591 -
Bisa06g2202 1113 SMART LRR_typ_2 307 331 IPR003591 -
Bisa06g2202 1113 ProSiteProfiles Protein kinase domain profile. 816 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g2202 1113 MobiDBLite consensus disorder prediction 1092 1113 - -
Bisa06g2202 1113 SUPERFAMILY RNI-like 72 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2202 Bisa-ChrBisa06 66426791 66430223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2202 15 1101 Receptor kinase-like Gene Family AT1G73080 53.672 0.0 1108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa06g2202 Pkinase 6.5e-43 CL0016