Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2201 ATGAAACTCCTACTGCTGATCCTATGCTTCTCTGCCCTTTCATACGGTGCTTCTGCTTTGAGCTCTGATGGGTTGACTCTATTGTCACTCCTAAAGCACTGGACTTTTGTGCCTCCTTCCATCGCTTCAAGCTGGAATGCTTCTGATTCTACCCCATGCTCATGGGTGGGAGTACAGTGTAACCATAACAGCTCTGTGGTCTCTCTTAATCTCACTGCTTCTGGGATTAATGGCAAACTCGGACCAGAAATTGGACACCTGAATCACTTGCAAGCCCTTGTACTGTTGACAAACCATTTCTCAGGTACAATACCCTCAGAATTAGGCAATTGTAGTCTGCTTGAGTATATTGACCTTTCTGAAAACTACTTTAGTGGAGAAATACCTTCAGAGCTGACAGAGCTCAAGAATCTTAGAAATGTTTCACTGTTTGATAACAGTTTATCTGGAGTCATACCTCAAAGCTTGGGGATCAACAGCAGTTTAGTGAAATTGAATTTGATGAATAATAAGTTCACTGGTAACATCCCACCAAATCTTTGTTTTGGAAAGCAATTAGGCCTACTGAATTTAGGGCTTAATCAACTGCAAGGAGAAATTCCTGGTGATGTAGGGAGATGTGAAACTCTTAGGAGGTTAATTCTTAAAGGAAATAATCTTAATGGGTCTCTTCCTGATTTTGGGAGTAATCAGAATCTCAAGTACATTGACATCAGTGAGAACAACATCAGTGGAGCAATTCCCTTGAGTTTGGGAAACTGCAGTAATCTTGTTGAAATTAATTTGTCCATGAACAAATTAAGGGGTCATATACCGTCCGAGTTAGGAAACCTTGTGAATCTGTGGATTTTGAATCTTTCTGACAACAATTTGGAAGGTCCTTTGCCGCCGCATCTGTCAAACTGTGGCAAAATGGATTATTTTGATGTGGGATTCAATAACCTAAATGGTTCACTACCATCAAGTTTGAAGAACTGGAATAGAATAACCACATTAGTTTTAAGAGAGAATCATTTCACTGGAGGTATTCCGGATTTCTTGTCAGAATTTCAGAAGCTTCTTGAGCTACAACTTGGTGGAAACTCGTTTGGAGGTGAGATTCCTGGATCACTAGGAAAATTGCAGAATCTCTTCTATGAATTGAATCTAAGTGCTAATAGATTGACAGGCGAAATTCCTTCAGAATTTGCGTACCTTAATAAGCTGCAAAATCTGGATCTATCTGTAAACAATTTGACAGGAAATGCAAATATTCTCATAGAACTTTCTTTAATAAATGAATTCAATATTTCAAAAAATCCCCTTTTGGGTTCTGGCCTTTGTGTCAATTGTTCAGATTTAGAAAGTTCAAGTTGCACTGAATTTGAAACTAGATTTCATTTGAAGCCATGTGACCTCACATCAACTAACAAGAGTGATCTGAGCATAAGTAAAATAGTGATGATAGAGCTTGGATCTTCAATCTTCCTTTTTCTATTGCTTCCAAGACTGGTTTACATGTATCTGAATTACAGATCTAAGCAGAAAGAAAAGGAAAAAGAAGCCAAATTGTCAAGAAATATTGACAGAGTGGTCCATGGGATTGTTGGAGATGAGCCATCCTCTTTGCTAGTCAACGAAGTGATGAAAGCTACAGATAACCTAAATGACAAGCATATCATCGGCCGAGGAGCCCATGGAGTTGTTTATCAAGCCTCAATCGACCCTCCATCAAATCACATAGTTGCAGTGAAGAAGGTTGTATTCACAAGGAACAAAGGGAGGAGCTTAAGCATGCTGAGAGAAATTGAAACTGTCAGGAAGATCAAGCATCGCAATTTAGTCAAATTCGAAGGCTTTTGGATGGGAAAGGACTATGGTCTAATCTTCTACCCTTACATGTCCTCTTCTTTCCCAGCAAAAAAGCGATCCACATACATTGCGCTAGGCACAGTTGGGTATATTGCACCAGGTAATGCTTCTATACGTGTTATGGGAGAATCGGTCTTGATCTTTCACATGGGTTAA 2007 0.3941 MKLLLLILCFSALSYGASALSSDGLTLLSLLKHWTFVPPSIASSWNASDSTPCSWVGVQCNHNSSVVSLNLTASGINGKLGPEIGHLNHLQALVLLTNHFSGTIPSELGNCSLLEYIDLSENYFSGEIPSELTELKNLRNVSLFDNSLSGVIPQSLGINSSLVKLNLMNNKFTGNIPPNLCFGKQLGLLNLGLNQLQGEIPGDVGRCETLRRLILKGNNLNGSLPDFGSNQNLKYIDISENNISGAIPLSLGNCSNLVEINLSMNKLRGHIPSELGNLVNLWILNLSDNNLEGPLPPHLSNCGKMDYFDVGFNNLNGSLPSSLKNWNRITTLVLRENHFTGGIPDFLSEFQKLLELQLGGNSFGGEIPGSLGKLQNLFYELNLSANRLTGEIPSEFAYLNKLQNLDLSVNNLTGNANILIELSLINEFNISKNPLLGSGLCVNCSDLESSSCTEFETRFHLKPCDLTSTNKSDLSISKIVMIELGSSIFLFLLLPRLVYMYLNYRSKQKEKEKEAKLSRNIDRVVHGIVGDEPSSLLVNEVMKATDNLNDKHIIGRGAHGVVYQASIDPPSNHIVAVKKVVFTRNKGRSLSMLREIETVRKIKHRNLVKFEGFWMGKDYGLIFYPYMSSSFPAKKRSTYIALGTVGYIAPGNASIRVMGESVLIFHMG 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2201 668 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Bisa06g2201 668 ProSitePatterns Protein kinases ATP-binding region signature. 554 579 IPR017441 GO:0005524
Bisa06g2201 668 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 506 626 - -
Bisa06g2201 668 Gene3D Ribonuclease Inhibitor 314 458 IPR032675 -
Bisa06g2201 668 PANTHER OS04G0122200 PROTEIN 190 628 - -
Bisa06g2201 668 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 19 180 - -
Bisa06g2201 668 SUPERFAMILY L domain-like 350 504 - -
Bisa06g2201 668 Gene3D Ribonuclease Inhibitor 182 313 IPR032675 -
Bisa06g2201 668 SUPERFAMILY Protein kinase-like (PK-like) 530 629 IPR011009 -
Bisa06g2201 668 Pfam Protein kinase domain 550 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g2201 668 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 181 457 - -
Bisa06g2201 668 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Bisa06g2201 668 SUPERFAMILY RNI-like 68 377 - -
Bisa06g2201 668 Gene3D Phosphorylase Kinase; domain 1 526 626 - -
Bisa06g2201 668 ProSiteProfiles Protein kinase domain profile. 548 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g2201 668 Pfam Leucine rich repeat 232 291 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2201 Bisa-ChrBisa06 66420537 66422771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2201 64 627 Receptor kinase-like Gene Family AT1G73080 44.957 3.15e-147 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa06g2201 Pkinase 7.7e-10 CL0016