Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2194 ATGGGACACCAATTATTGATCCTATGCTTCTCTGTACACTTGTATGTTGCCTCTGCTTTGAGCTCCGACGGGTTGACTCTATTGTCACTCCTAAATCACTGGACTTTTGTGCCTCCTTCCATAAATTTGAGCTGGAATGCCTCTGATTCTACCCCATGCTCATGGGTAGGAGTAAAATGCAACCATGACAGTCAGGTGATCTCCCTTAATCTCACTGCTTCTGGGGTTACTGGTAAACTTGGTCCAGAAATTGGAAACTTGAATCACTTGCAGACAATTGTGTTGTTGACTAACAATTTGTCTGGAGTAATACCCCCAGAATTAGGCAATTGTAGCCTGCTTCGGTATATAGAAGTTTCTGATAACTACTTTAGCGGACAAATACCATATACCTTGAAAAAGTTGCAAAATTTGCAGTATTTGAGCCTTTCTTATAATATGCTGACCGGTGAAATCCCTGAGTCCTTGTTTCAAATTCCTCAGTTGGAAGAGGTGTACCTGTACAACAATGGTGTAAGTGGTCCTATCCCCACCAATATTGGCAACATGAGTGAACTGTCAAAGCTGTATCTATCCAGTAATCAGTTGTCTGGGAACATTCCCTCTTCCATAGGTAATTGCAGTAAATTACAGGACCTTGAATTGTATTTCAACCATTTGCAGGGTGAAATTCCACTTGGCATTTGGAAGGTTCAAAGTCTTCAGCATATTCTTGTTCATAATAATAGCCTTTCTGGGACATTACCTCTGGAGGTGACAGAGCTCAAGCATCTTAAAAACATCTCGCTGTTTGACAACCAGTTCTCTGGAGTCATACCGCAAAGCTTGGGAATCAATAGCAGTTTAGTGAAGTTGGACTTGATGAATAATGAGTTTACTGGTAACATCCCACCGAATCTTTGCTTTGGAAAGCAATTACGTGTGTTAAATTTAGGTCTTAATCAACTACAAGGTGGCATACCCCATGATGTAGGAAGATGTGCAACACTTAGCAGGTTGACTCTGAACGAAAATAATTTTACTGGGTCTCTTCCTGAATTTGAAAGTAACCAGAATCTCATGTACATGGACATCAGCAAGAACAACATCAGTGGAGCAATTCCATCAAGTTTGGGAAACTGCACAAACCTCACTGCTTTAATTTTGTCCAAGAACATCATTACAGGGCTCATACCCTCAGAGTTAGGAAACCTCGTGAACCTTCAGTTTTTGAATCTTGCTCACAATAAGTTAGAAGGACCTTTGCCACAGCTGCTGTCATACTGTACAAAAATGGAATGGTTTGATGTGGGATTCAATTTTCTAAATGGTTCATTACCATCTAGTTTAAGGAACTGGACAGAGATAACAACATTAATATTAAGAGAGAATCGTTTTAGTGGGGTTATCCCATCTTTCTTGTCAGAATTTAACCTGCTTCTCGATCTACAACTTGGTGGAAATCTTTTTGGAGGCAAAATTCCTGCATCAATTGGAGCAATGCAAAATCTCTTATATGGGTTGAATCTGAGTGCTAATGGATTCGCTGGTGAGGTTCCTTTGGAAATTGGGAAGCTGAAAAAGCTACAAGTTCTGGACGTATCCCTGAACAATTTGACAGGAAGCATAGATGTCCTCGGTGAACTTTCTTCATTAATTGAAGTCAATATTTCATACAACTCCTTTGTGGGTCCTGTACCGGAAAGGCTGCTGCAATATCTGAATTTTTCTGCTTCATCATTCATGGGCAATCCTGGTCTATGTGTACATTGTTATGGCTTGAGTTGCTCTAAACCTAGGCCTAGTTACTTAAAGCCATGTGACGCAACTGATCACAAAGGTATCTCTAAATCTGTAATTTTGGTTATAGAACTTGGATCCTCAACGTTGGTTGCTCTTTTTTTGGTAAAGCTAATTCACCTGCGTCTCTCGCGCCAAAGATCTGAGGAGATCATGATTGTCTATAGGAAAGACGAAGGGCAATTTCACCCAAAAAAGAAAGAGGAAGGGCAATTTCACCCAAAAAAGAAAGAGGAAGGGCAATTTCACCGGAAAAGAAAAGAAAAAGAGGAAGGGCAATGGTTTGGGGAAGTGATGAAGGCTACTGAGAATCTGGGTGATCGATATATTGTTGCAAGAAGAGTGGATGGAATTGTTTATAAAGCCGAACCTACTTTTGGGGAAGTGATGAAGGCTACTGAGAATCTGGATGATCGATATATTGTTGGAAGAGGAGCGCATGGAATTGTTTATAAAGCCGAACTTGATCATTTCAGAGTTTTTGCCGTAAAGAAGCTTGTCTTTGCAGGGAACAAAAGGAAAATATCAAGAATGCGTAGAGAAATTGAAATCATGAAGAACCTCAGGCATCGATATGTGGCAAGATTCCGAGGCTCTTGGATAGGAAATGAGCACGGTTTGATCTTCCTAAGGACTTCTGTGCCTCCTTTTATAAGTTCAAGCTGGAAGTACACTGATTTCACTCCATGCTCATGGGTAGGAGTACAGTGCGACAGTGACAGCAATGTGATCTCCCTTAACCTCACTGCTTCTGGTATCACTGGTGTTAACGTTCTCGAGCTATCATTGTAG 2571 0.408 MGHQLLILCFSVHLYVASALSSDGLTLLSLLNHWTFVPPSINLSWNASDSTPCSWVGVKCNHDSQVISLNLTASGVTGKLGPEIGNLNHLQTIVLLTNNLSGVIPPELGNCSLLRYIEVSDNYFSGQIPYTLKKLQNLQYLSLSYNMLTGEIPESLFQIPQLEEVYLYNNGVSGPIPTNIGNMSELSKLYLSSNQLSGNIPSSIGNCSKLQDLELYFNHLQGEIPLGIWKVQSLQHILVHNNSLSGTLPLEVTELKHLKNISLFDNQFSGVIPQSLGINSSLVKLDLMNNEFTGNIPPNLCFGKQLRVLNLGLNQLQGGIPHDVGRCATLSRLTLNENNFTGSLPEFESNQNLMYMDISKNNISGAIPSSLGNCTNLTALILSKNIITGLIPSELGNLVNLQFLNLAHNKLEGPLPQLLSYCTKMEWFDVGFNFLNGSLPSSLRNWTEITTLILRENRFSGVIPSFLSEFNLLLDLQLGGNLFGGKIPASIGAMQNLLYGLNLSANGFAGEVPLEIGKLKKLQVLDVSLNNLTGSIDVLGELSSLIEVNISYNSFVGPVPERLLQYLNFSASSFMGNPGLCVHCYGLSCSKPRPSYLKPCDATDHKGISKSVILVIELGSSTLVALFLVKLIHLRLSRQRSEEIMIVYRKDEGQFHPKKKEEGQFHPKKKEEGQFHRKRKEKEEGQWFGEVMKATENLGDRYIVARRVDGIVYKAEPTFGEVMKATENLDDRYIVGRGAHGIVYKAELDHFRVFAVKKLVFAGNKRKISRMRREIEIMKNLRHRYVARFRGSWIGNEHGLIFLRTSVPPFISSSWKYTDFTPCSWVGVQCDSDSNVISLNLTASGITGVNVLELSL 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2194 856 MobiDBLite consensus disorder prediction 657 681 - -
Bisa06g2194 856 SMART LRR_typ_2 183 207 IPR003591 -
Bisa06g2194 856 SMART LRR_typ_2 519 542 IPR003591 -
Bisa06g2194 856 SMART LRR_typ_2 398 421 IPR003591 -
Bisa06g2194 856 SMART LRR_typ_2 135 159 IPR003591 -
Bisa06g2194 856 Pfam Leucine rich repeat 352 411 IPR001611 GO:0005515
Bisa06g2194 856 Pfam Leucine rich repeat 114 170 IPR001611 GO:0005515
Bisa06g2194 856 Gene3D Phosphorylase Kinase; domain 1 715 803 - -
Bisa06g2194 856 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Bisa06g2194 856 Pfam Leucine rich repeat N-terminal domain 809 831 IPR013210 -
Bisa06g2194 856 Gene3D Ribonuclease Inhibitor 804 855 IPR032675 -
Bisa06g2194 856 Gene3D Ribonuclease Inhibitor 233 591 IPR032675 -
Bisa06g2194 856 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 304 590 - -
Bisa06g2194 856 ProSitePatterns Protein kinases ATP-binding region signature. 735 758 IPR017441 GO:0005524
Bisa06g2194 856 SUPERFAMILY RNI-like 68 388 - -
Bisa06g2194 856 SUPERFAMILY Protein kinase-like (PK-like) 715 799 IPR011009 -
Bisa06g2194 856 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 19 178 - -
Bisa06g2194 856 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 346 - -
Bisa06g2194 856 SUPERFAMILY L domain-like 296 593 - -
Bisa06g2194 856 Gene3D Ribonuclease Inhibitor 20 232 IPR032675 -
Bisa06g2194 856 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 180 276 - -
Bisa06g2194 856 ProSiteProfiles Protein kinase domain profile. 729 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2194 Bisa-ChrBisa06 66301459 66311542 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2194 807 848 Receptor kinase-like Gene Family AT1G73080 47.727 4.22e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa06g2194 LRR_8 1.3e-09 CL0022