Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2178 ATGGAGTCAACCTGTGTGTTAGTGGTGATGTTTCTGTCAGTCTCATGGCTGTGTTTGCATGGCGATGGAGCCAACGTCGTCGTATCGCAGGATGGGAGTGGAAACTACACGAGTGTGGGTGAAGCCATAGCCAAAGCTCCAAACCAAAGCCCGAAACCCTACACTATCCACGTTCGAAGTGGGACTTATCAAGAATACGTCGTCGTTCCATCCCACAAAACCAACATCAAGCTCACCGGCGACGGCCCTCATCACACCCGAATTGTTGGCTACAAAAATGGCACCACACTAGATGTATATGGAGCAGACTTCATAGCCCAAAACATAGGGTTCGTGAGCTCAGAAAGCCTTAACGCAAGTGCGGCGGTGGCGGTTCGCAATGAAGCAAACAACAGCATATTCTTCAATTGCTCCATTGAAGGCTTCCAAGACACACTTTGGGCGGTTTCCGGCCGTCAATTTTACAAACAATGTAACATCTCCGGCACCGTCGACTTCATCTACGGCGACGCCGCCGCCGTCTTCCAAGACTGCTTCCTCTACGCACGCTACAGGCTGTACGTGACCTTCACCGCCCAATCACGTGAAAAGCCTAACGAGCACACCGGCTTCGCCTTCCAAAGGTGTAACTTCACGATGGCTCCAGAGGACTACGATCGCAAGTCGGAGGTACGCGCCACCTTGGGAAGGCCGTGGAGGGCCTATGCCACTGTGGCAATTGTGGGGTCCTTCATAGACTCTATGGTGGACCCCAAGGGGTGGGAGGAGATGGCAGGTCAGCCTACTGATGAGGTGACGTACGTGGAGTTTGATAATTTTGGGCCTGGGTCTGGGACCCAGAAGAGAGTGAAGTGGGCCGGTGTTAGAGAGCTTCGTGGGCCTGAGGAAGCCCGGGCTTTCACTCCTTCGGTTCTTTTGGATGCTGAATCTTGGATTCCTCTTAAAGGTGTTCCTTATGATGATGGATTGTTGGATGAGATTGCAAAAGCTGTGTCATTTTGTGGCGCCAAACGGTCCAAACCAACAGTAGAAGCAGAAAGCACTCCTTCCATGGCTCCTATCTATTGCTCTGCCTCTCAATTCTCCAGGCTCTCACCTTTCTCGCTTCTCAAGCTCTCTTGCCCTGCATTTCCCAATTTCGCTTCAACCAGATATCCATTTTCTGTTCGTTGCGCCAATCAAAACGACGGAGAAGACTCTAAGAGCAAAAGGCTCTCCGATCAGTCGTCCTGGGAAGCCAAAGATGCCGAAGGCAGAGACTATCTCTATAGGCTGGGCAAAGAGGCCGATAACATGAACATCGCTGTTGGCCAGAGGGCTGGAGTCATCGATGACCTTTTCGCGGGAAATTTTCTCGGCAAAGATTCGGACATTGTGTTTGATTATCGTCAGAAAGTGACGAGGTCGTTTGAATACCTTCAAGGTGATTACTACATCGCCCCCGTCTTCATGGACAAAGTTGTGTGCCACATTGTGAAGAACTACATCGCTCATCTCCTCAATACTAAAGTTCCCCTGATCCTAGGCATTTGGGGAGGAAAAGGGCAGGGGAAATCATTTCAAACAGAACTCATATTTCAGACCATGGGAATTGAACCTGTAATAATGTCTGCTGGGGAATTAGAGTCAGAGCGAGCTGGAGAACCCGGAAAATTGATTCGTGAGCGCTATAGAACAGCATCTCAAGTGGTCCAGAACCAAGGAAAAATGAGCTGTTTGATGATCAATGATATTGATGCCGGCCTTGGTAGATTTGGTAATACTCAAATGACAGTCAACAATCAAATTGTTGTGGGGACTCTTATGAATCTATCAGACAATCCTACAAGAGTAAGTGTTGGCCAAGATTGGCGGGAAGCAGATGTCACAAACAGAATTCCAATAATTGTAACAGGGAATGATTTTTCTACTATTTATGCTCCACTGATACGTGATGGAAGGATGGATAAGTTTTACTGGCAACCTAACCGTGAAGATATTGTCAATATCGTTCACAGAATGTATGAGAAAGATGACATTTCTATGGATGAAGTTATAAGAATTGTGGACACTTTTCCTAATCAAGCTTTGGACTTTTATGGAGCTCTTAGGTCTCGCACATATGACAGATCTATTTTAAAGTGGATTGATGATATTGGAGGTGCTGAAAATCTTGGAAACAAACTTCTCAAGAGAAGAAAGGACAACAGCCTTCCCGTATTTACTCCTCCAGAGCAAACATTCGAGGCTTTGCTTGAGTCAGGCAATTCTCTTCTCAAAGAACAGATGTTGATAATGGAAACCAAACTTTCTAAGGAATACATGAAGAATATAGATGACTAG 2322 0.4694 MESTCVLVVMFLSVSWLCLHGDGANVVVSQDGSGNYTSVGEAIAKAPNQSPKPYTIHVRSGTYQEYVVVPSHKTNIKLTGDGPHHTRIVGYKNGTTLDVYGADFIAQNIGFVSSESLNASAAVAVRNEANNSIFFNCSIEGFQDTLWAVSGRQFYKQCNISGTVDFIYGDAAAVFQDCFLYARYRLYVTFTAQSREKPNEHTGFAFQRCNFTMAPEDYDRKSEVRATLGRPWRAYATVAIVGSFIDSMVDPKGWEEMAGQPTDEVTYVEFDNFGPGSGTQKRVKWAGVRELRGPEEARAFTPSVLLDAESWIPLKGVPYDDGLLDEIAKAVSFCGAKRSKPTVEAESTPSMAPIYCSASQFSRLSPFSLLKLSCPAFPNFASTRYPFSVRCANQNDGEDSKSKRLSDQSSWEAKDAEGRDYLYRLGKEADNMNIAVGQRAGVIDDLFAGNFLGKDSDIVFDYRQKVTRSFEYLQGDYYIAPVFMDKVVCHIVKNYIAHLLNTKVPLILGIWGGKGQGKSFQTELIFQTMGIEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQGKMSCLMINDIDAGLGRFGNTQMTVNNQIVVGTLMNLSDNPTRVSVGQDWREADVTNRIPIIVTGNDFSTIYAPLIRDGRMDKFYWQPNREDIVNIVHRMYEKDDISMDEVIRIVDTFPNQALDFYGALRSRTYDRSILKWIDDIGGAENLGNKLLKRRKDNSLPVFTPPEQTFEALLESGNSLLKEQMLIMETKLSKEYMKNIDD 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2178 773 PANTHER - 393 771 IPR044960 -
Bisa06g2178 773 FunFam Pectinesterase 4 23 323 - -
Bisa06g2178 773 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 679 IPR027417 -
Bisa06g2178 773 Pfam Pectinesterase 25 307 IPR000070 GO:0030599|GO:0042545
Bisa06g2178 773 Pfam ATPase family associated with various cellular activities (AAA) 510 652 IPR003959 GO:0005524|GO:0016887
Bisa06g2178 773 Gene3D - 470 655 IPR027417 -
Bisa06g2178 773 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 469 655 - -
Bisa06g2178 773 SUPERFAMILY Pectin lyase-like 23 321 IPR011050 -
Bisa06g2178 773 Gene3D - 23 325 IPR012334 -
Bisa06g2178 773 Gene3D - 656 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2178 Bisa-ChrBisa06 66059261 66073881 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2178 25 324 Carbohydrate Esterase AT3G05610 42.173 1.22e-74 254