Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2170 ATGAAGAAGAAGAAGCATCCCGTTGGGGAGGTGGAGAAGAAGAAGTACCCCATTGGAGCCGATAATTATGATCTCTACGAGGAGATTGGCCGGGGCGTGAGTGCCTCAGTGCACCGTGCTATTTGTGTACCCTTCAATGAGATTGTTGCCGTCAAAATTATTGATTTTGAACGTGATCATTCTAATCTGAATAACATTTTTCGTGAAGCACAGACAATGAACTTGATTGACCACCCTAATGTCCTTAAATCGCATTGCTCCTTTGTTAGTGGCCATAATCTGTGGGTTGTCATGCCATTTATGGCTGGTGGTTCCTGTCTTCACATCTTGAAAGCTGCATACCCCGATGGTTTTGAGGAGGTTGTGATAGCCACAATATTGCGAGAGGTATTAAAGGGTTTAGACTATCTTCATGAACATGGGCATATACATCGAGATGTCAAATCTGGGAACATTCTAATTGATGGACGAGGTGAAATCAAGCTTGGAGATTTTGGTGTATCAGCTTTTCTTTTTGATTCTGGTGGCAGGCAACGCACAAGGAATACATTTGTGGGGACACCCTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCATGGTTATGACTTCAAAGCTGATATCTGGTCATTTGGTATAACTGCATTGGAGCTTGCTCATGGTCATGCTCCTTTCTCAAAGTTTCCACCGATGAAGGTACTGCTTATGACATTGCAAAATGAGCCACCTGGCCTTGATTACGAAAGGGATAACAAGTTCTCTAATATGATTGCTAGTTGTTTAGTAAAAGATCCTTCAAAGCGACCACCTGCAAAGAAGTTGCTAAAGCATTCCTTCTTTAGGAAGGCTCGATCAAATGATTATATTGCACGGACAATTTTGGAAAGGCTGCCTTCCTTAGGTGATTGCATGAAGGCCCTAAAGAAAAAAGAAGAAGACATGCTTGCTCAAAAGAAAATGCCTGATGGCCAAATGGAGGAATTATCTCAGAACGAATACAAACGAGGAATTAGTGGCTGGAACTTTGATCTTGATGAGATGAAGGCTGAGGCTTCCTTGATAGAGGATTTTGACTACTCTACAGATGTCATCAGCCAAGTAGGAAGTTCAAATTCCTTTTCTACACTTGATGCACAAGATAAGCAATCAGCAAGTCAAATTCAAAACCCCTCTCAAATTGTAGATATGGAAGTTAAGGATGAGATGCGAAATCAATTAGCTTCTATTCCTATAGTTGTTTCCACACTAAACGATGCCAATGAGAAGCCAGAAAATCAGCCCCAGAACATTTCAAACTGCAGTGCAACTACAATTTCATTGACTGGAGATATGATTCTTGAACTCACTTGTAATGCTTCAAATTTGTCAGTACCTAGTGTTGATGACAATGATGATAAAACAAAGGAACCAGTTGTTCAGCAGAAAGGACGATTTAAGGTTACATCTGAGAAAGTTGACATAGAAAAGGTATTCATGGTGTTTGACTTGCTTCTCTTGTTGTCAGATGAAAGAATTGATACTGATGGAGCCTTCACACCCGCACAGATAGCGGCAATTGAGAAATCCTTGGTACTTATAGGGTTCGGAATTCAATATCTATCATTCTATCTAGGAACCTTGTACACTTGGCTGTCTATCTGA 1641 0.4119 MKKKKHPVGEVEKKKYPIGADNYDLYEEIGRGVSASVHRAICVPFNEIVAVKIIDFERDHSNLNNIFREAQTMNLIDHPNVLKSHCSFVSGHNLWVVMPFMAGGSCLHILKAAYPDGFEEVVIATILREVLKGLDYLHEHGHIHRDVKSGNILIDGRGEIKLGDFGVSAFLFDSGGRQRTRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNEPPGLDYERDNKFSNMIASCLVKDPSKRPPAKKLLKHSFFRKARSNDYIARTILERLPSLGDCMKALKKKEEDMLAQKKMPDGQMEELSQNEYKRGISGWNFDLDEMKAEASLIEDFDYSTDVISQVGSSNSFSTLDAQDKQSASQIQNPSQIVDMEVKDEMRNQLASIPIVVSTLNDANEKPENQPQNISNCSATTISLTGDMILELTCNASNLSVPSVDDNDDKTKEPVVQQKGRFKVTSEKVDIEKVFMVFDLLLLLSDERIDTDGAFTPAQIAAIEKSLVLIGFGIQYLSFYLGTLYTWLSI 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2170 546 SMART serkin_6 23 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g2170 546 Pfam Protein kinase domain 23 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g2170 546 CDD STKc_OSR1_SPAK 21 280 - -
Bisa06g2170 546 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Bisa06g2170 546 ProSiteProfiles Protein kinase domain profile. 23 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g2170 546 Gene3D Transferase(Phosphotransferase) domain 1 104 334 - -
Bisa06g2170 546 FunFam Serine/threonine-protein kinase BLUS1 12 100 - -
Bisa06g2170 546 FunFam serine/threonine-protein kinase BLUS1 isoform X1 104 333 - -
Bisa06g2170 546 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 12 493 IPR047173 GO:0043539
Bisa06g2170 546 SUPERFAMILY Protein kinase-like (PK-like) 20 299 IPR011009 -
Bisa06g2170 546 Gene3D Phosphorylase Kinase; domain 1 11 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2170 Bisa-ChrBisa06 65967871 65973456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2170 11 490 MAP Kinase Kinase Kinase Kinase AT1G79640 61.232 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Bisa06g2170 Pkinase 1.3e-56 CL0016