Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2166 ATGATGGATGGTTGCAAAAAATCCTCCAGTTTAGGTCATTCTTACAATTCCCTCTATGTCAATCCCCTCACTGAACTAAAACACACTCGTAGCTGCAGTGACTATGGCCGCTTAGCCTCCAGAGGTGACAACTTTGAAGATTTTACTCATCGAGACCCAAAAATTTCAGTTCATAACAAGGAGAATGCCGAACCCAACAAGGAAAATCCAGAGTCCAAAAGTGGGTCTTCTTCTTTGCCCAAACACTTCTCAAAGTCCAAGTCTTTGTCCACAGAGAGGATTCTGAAGCCAAATTCGCTTCAGTTCTGTATGCAAATGAACGAGCCTGAAAGGGATTATGGGTCCAGGATATGGGATTCTGTGTGTTCTGAAAATTCAACCTCTTTGAATATTTGGGATCACTCTGATTCAGAGGCAGCTCCAGCTTCATCTTGGTCAACATTGCCCAATAAGTCTTTGATCTGTAGACCCTTGCCTATAGATATTGGAAGGTGTACATGTGTCATTGTGAAGGAAGCAAAGCCAGAAGGATTATCTGGAGGCACTATGTTTTCCCTTTATACTTATGAAGGTCAGGGACGTCAAAATCGGAACCTCGCCGTGGCTCATCACAAGAGGCGAAACGGGAGGTCTCAGTTCATCATAGCTCAGAATGTAAAAGGTCTATTGTCCAATTCAGATGATAGTTTTCTTGGGACTGTAACAGCTAACCTCATGGGTTCAAAATACCAAATTTGGGACCAGGGATATAGTCATAATTCCCATGATAAACAGTCAAAACCACCTCTTGCTGTTGTGATGTTTATACCTACAGTATCAACATGTACAGGAAGTTACAGAGGCATGAGGGCATATGTACCCAAGCATCAATCTATGTCACTCAAGAACACAACCCAGGCAAAACATATCAAAGGACTGCCAATGGATTGGGAGGAAAAGTTGGACAAAGTCCATAAACTATTTTCGAGGGTTCCACTTTACAACAAGGTTTCAAAGCAGTTTGAACTTGACTATAGAGATAAAGGAAGAGCAGGACTCAGAATCCAAAGATCAGTAAAAAATTTCCAGCTGACTTTGGAGGAGAATGGGAGGCAGACTATCCTTCAACTAGGTAGAGTCGATAAATCGAACTTCGTTATGGATTACAGATATCCTTTGACAGGTTACCAGGCATTTTGCTTATGTCTAGCTTCCATTGATACAAAGCTTTGTTGCACCATGTAG 1224 0.4191 MMDGCKKSSSLGHSYNSLYVNPLTELKHTRSCSDYGRLASRGDNFEDFTHRDPKISVHNKENAEPNKENPESKSGSSSLPKHFSKSKSLSTERILKPNSLQFCMQMNEPERDYGSRIWDSVCSENSTSLNIWDHSDSEAAPASSWSTLPNKSLICRPLPIDIGRCTCVIVKEAKPEGLSGGTMFSLYTYEGQGRQNRNLAVAHHKRRNGRSQFIIAQNVKGLLSNSDDSFLGTVTANLMGSKYQIWDQGYSHNSHDKQSKPPLAVVMFIPTVSTCTGSYRGMRAYVPKHQSMSLKNTTQAKHIKGLPMDWEEKLDKVHKLFSRVPLYNKVSKQFELDYRDKGRAGLRIQRSVKNFQLTLEENGRQTILQLGRVDKSNFVMDYRYPLTGYQAFCLCLASIDTKLCCTM 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2166 407 MobiDBLite consensus disorder prediction 43 90 - -
Bisa06g2166 407 MobiDBLite consensus disorder prediction 69 90 - -
Bisa06g2166 407 PRINTS Tubby superfamily signature 343 359 IPR000007 -
Bisa06g2166 407 PRINTS Tubby superfamily signature 230 254 IPR000007 -
Bisa06g2166 407 PRINTS Tubby superfamily signature 363 382 IPR000007 -
Bisa06g2166 407 PRINTS Tubby superfamily signature 384 406 IPR000007 -
Bisa06g2166 407 MobiDBLite consensus disorder prediction 43 68 - -
Bisa06g2166 407 Gene3D Tubby Protein; Chain A 146 406 IPR025659 -
Bisa06g2166 407 PANTHER TUBBY-RELATED 59 404 - -
Bisa06g2166 407 SUPERFAMILY Tubby C-terminal domain-like 142 406 IPR025659 -
Bisa06g2166 407 Pfam Tub family 156 401 IPR000007 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2166 Bisa-ChrBisa06 65929201 65931631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2166 20 300 TUB Transcription Factor Family AT1G16070 49.650 3.23e-89 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Bisa06g2166 Tub 2.3e-41 CL0395