Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2160 ATGGTGTTGTGGCAACCCGTCGTGAATCCCAAACGTCCCGTCGGTCCGATCAGGGTCGTCAACGTAGACGGAAAGCCGGTGGTGGAGCTTCACTACAAAGGCGAAACACGACGGTTCACTACAGAGGACATTGTTACGTTGATGATCGCCGAAGAGAAAAAGCTTCGCCTCCATAACCCCAAGAACTGCTTCTTCATGATCCCCTCCTACTTCACCTTCTTACAGAAGATGAACACCATGAATGCCTGGATCTACGCGGGCGTCCCCGAAGTCATGCTCATCGAGGAGCCCCTCTTGGCCATCATCGCCTACAGTCTCCACGACAACCCCGCAGTAACCGAAAAGAACGTCTTCGTCTTCGATCTTGGAGCGACCTCTCTCGCAATCTCCATGCTCACGCAGTTCCCGGAAGACGGATTCTTCAGAGTCATCGCGAACTCAGGTCAGATCCCCATCGGCGGCGTAGACTTCACGAACAGGCTCGTGAATTACTGTGTCGCGGAGTTCAAGATCAAACGTGGGAAGGATGTGAGTAACAATGTCAGAGCATTGAAGAGATTATGGTATGCCTGCGAGAGAGCGAAAAGGGTTCTCTCCACGAAAGCCCTCACGACTATTGAAATTGATAATTTCTACGAAGGGGTCGATTTCTTCTCCACGATCTCGAGACCCACATTGGAGCAATTAAACACGGAGTTGCTGGGTAAGATCACTGATAAAGTGCGCGATTTCATCAAGGAGGAGAACTTGGATGAGATTGAAATCCACGAAATCGTTCTCTGTGGTGGATCATCCTCGATGTATACGGTACAGAATCTTCTAGAAACATACTTTGAGGGGAAGAAGGTGCACGATGATATCCCCCCAGAACTGGTCGTCACTCTAGGGGCATTCTCCATAGCGAAAGCCTTCAACAGCCAGAAGAAGAAGCAGATGGACGAAGACGACGCCGTTTTCGAAGAAACAGAGCAGGTCCCTCTCGCAGTCGGAATCGAAGGGGACAACGGGGTCATGACTGTTCTTTTTCCGGCCGATACAAAAATACCCGCGAAGAAATATCATATCTTCACGACGCCTCCGAGAGGGGTTCCTCAGATTGAGGTGTGCATTGAGATTGGGAAGAATGGGAGAGTGAAGGGGTGGGCTCGTGATATGGCGACAGGAAAGGAGATGAGGGCGAGGTTCAAGACGGGGAGGGTTCTGAGCACGCAGCAGATGAACGAGGTGATGTTTAGGCAGGGGAAGAAGAGGACGGACGCCATGGAGTGCCTGAGGAGGTATATTTGCAGGATGACGAGTGCTTTGAAGGAGGGGGAAGGTGACGGAGGCAGAGTGGAAGGTGCAGAGAAGGAGATGGTGGAGAAGGAGATTCAGGAGACGATGGAGTGGTTGCAGAGAGACTCCGGGAAGATTAAGATTCGCCAGATTGTAGAAAGATTGGCGATGCTTCAAGATCTGTGGGAGCCTATCGTTGCCAGATTGAAGAGCTTCCCTCAGCCTCAGCCTCGGCCTGAGCATGAGCCTCAGCCTGAGACTGAGTCTGTGCATGAGCCTGAGCCTGCGACTAAGTCTGTGCATGAGCCTGAGCCTGAGCCTGAGACAGAGTCTGTGCATGAGCCTGAGCCTGAGACTGAGTCTGTGTGTGAGCCTGAGCCTGGGCCTGAGACTGAGACTGTGCATGAGCCTGAGCCTGAGCCTGAGAATTGA 1707 0.522 MVLWQPVVNPKRPVGPIRVVNVDGKPVVELHYKGETRRFTTEDIVTLMIAEEKKLRLHNPKNCFFMIPSYFTFLQKMNTMNAWIYAGVPEVMLIEEPLLAIIAYSLHDNPAVTEKNVFVFDLGATSLAISMLTQFPEDGFFRVIANSGQIPIGGVDFTNRLVNYCVAEFKIKRGKDVSNNVRALKRLWYACERAKRVLSTKALTTIEIDNFYEGVDFFSTISRPTLEQLNTELLGKITDKVRDFIKEENLDEIEIHEIVLCGGSSSMYTVQNLLETYFEGKKVHDDIPPELVVTLGAFSIAKAFNSQKKKQMDEDDAVFEETEQVPLAVGIEGDNGVMTVLFPADTKIPAKKYHIFTTPPRGVPQIEVCIEIGKNGRVKGWARDMATGKEMRARFKTGRVLSTQQMNEVMFRQGKKRTDAMECLRRYICRMTSALKEGEGDGGRVEGAEKEMVEKEIQETMEWLQRDSGKIKIRQIVERLAMLQDLWEPIVARLKSFPQPQPRPEHEPQPETESVHEPEPATKSVHEPEPEPETESVHEPEPETESVCEPEPGPETETVHEPEPEPEN 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2160 568 MobiDBLite consensus disorder prediction 497 568 - -
Bisa06g2160 568 SUPERFAMILY Actin-like ATPase domain 114 301 IPR043129 -
Bisa06g2160 568 Gene3D - 414 496 IPR029048 -
Bisa06g2160 568 PRINTS 70kDa heat shock protein signature 255 271 - -
Bisa06g2160 568 PRINTS 70kDa heat shock protein signature 287 307 - -
Bisa06g2160 568 PRINTS 70kDa heat shock protein signature 363 379 - -
Bisa06g2160 568 PRINTS 70kDa heat shock protein signature 63 83 - -
Bisa06g2160 568 Gene3D - 13 47 - -
Bisa06g2160 568 Gene3D Actin; Chain A, domain 4 154 236 - -
Bisa06g2160 568 SUPERFAMILY Actin-like ATPase domain 12 107 IPR043129 -
Bisa06g2160 568 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 302 358 IPR029047 -
Bisa06g2160 568 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 419 501 IPR029048 -
Bisa06g2160 568 MobiDBLite consensus disorder prediction 554 568 - -
Bisa06g2160 568 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 359 413 IPR029047 -
Bisa06g2160 568 Pfam Hsp70 protein 6 358 IPR013126 GO:0005524|GO:0140662
Bisa06g2160 568 Pfam Hsp70 protein 360 494 IPR013126 GO:0005524|GO:0140662
Bisa06g2160 568 PANTHER HEAT SHOCK PROTEIN 70KDA 16 460 IPR013126 GO:0005524|GO:0140662
Bisa06g2160 568 Gene3D - 109 284 - -
Bisa06g2160 568 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 325 410 IPR029047 -
Bisa06g2160 568 Gene3D - 48 298 - -
Bisa06g2160 568 MobiDBLite consensus disorder prediction 506 545 - -
Bisa06g2160 568 FunFam Heat shock 70 kDa 153 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2160 Bisa-ChrBisa06 65895079 65896893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2160 6 500 Calmodulin-binding Proteins AT3G12580 33.759 2.34e-92 295