Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2145 ATGGACTGCAGACAGATACAGAGACAGACAGAGACAGAAACAGTGGATCACAGACACCAACAACATAGTTCACCTTCTTCACCACCTCGTCTGGTGCTGGATCTGAGTCTCTCTCGGAGCAACCCAGGTGACGATGAATCATCCTCTGACTCTCCCAGGATCTTCTCATGCAACTACTGCCACAGGAAATTCTACAGCTCGCAGGCACTTGGGGGTCACCAAAACGCACATAAGCGCGAGAGAACTTTAGCAAAAAAAGGACGCACTCACAATCACAGTCTCAGAATCGGTGCTTCAGTTTCTGCAGATTTTGGACACAGACATTACTATCACTGCTCTACCATGGCTTCTCTTCCCTTGCATGGATCCTTCAACAGACCACTTGGGATTCAAACGCATTCCATGATTCACAAGCCCTCTTTTCCACCACCCATTCTTGGGTCCTCTCGTTTCCAGAAGCTTCCCTTCGAGAATTCCCACGTTGGACCAGACACTCAGCCATCTTCGGCTTCTGTGATTCCCAGGTTACCTAGGTTTTCTCGAGTGCCTGTGACAGTGGAGATGCAGAAGCTTGACTTGTCTCTCAAACTCTAA 594 0.4882 MDCRQIQRQTETETVDHRHQQHSSPSSPPRLVLDLSLSRSNPGDDESSSDSPRIFSCNYCHRKFYSSQALGGHQNAHKRERTLAKKGRTHNHSLRIGASVSADFGHRHYYHCSTMASLPLHGSFNRPLGIQTHSMIHKPSFPPPILGSSRFQKLPFENSHVGPDTQPSSASVIPRLPRFSRVPVTVEMQKLDLSLKL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2145 197 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Bisa06g2145 197 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 13 159 IPR044246 GO:0009788
Bisa06g2145 197 MobiDBLite consensus disorder prediction 1 20 - -
Bisa06g2145 197 MobiDBLite consensus disorder prediction 21 51 - -
Bisa06g2145 197 SUPERFAMILY beta-beta-alpha zinc fingers 53 83 IPR036236 -
Bisa06g2145 197 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Bisa06g2145 197 Gene3D Classic Zinc Finger 38 107 - -
Bisa06g2145 197 MobiDBLite consensus disorder prediction 1 51 - -
Bisa06g2145 197 FunFam Zinc finger protein 2 34 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2145 Bisa-ChrBisa06 65747186 65747779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2145 52 197 C2H2 Transcription Factor Family AT1G80730 45.562 1.42e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa06g2145 None None None