Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2143 ATGGACAATAATGAGGAAATTCCATCAGTGCCTTCAACACCTGCAACACCAGGGACTCCTGGTAGACCTCTCTTTGGAGGGTTTAGGTCAGAGAGAACTAAAGGGAATGGTTTCGGGAATAAATCACTTCTTACGAACTGCAAGTGTTTCGGTGTTAAAGAATGGACTGTGGAAGAAGGAGCTCTGCCCACAGTCTCTTGCACATTGCCACCCCCTCCTATCCCTCTTGCAAAAAAGGTAGGAGCTGAGTTTATAGGCACCTTCATCCTCATGTTTGCTGGGACAGCCGCTGCAATTGTGAACCAGAAAACGAATGGCTCTGAGACTCTGATCGGATGTGCTGCCACCACCGGCCTCGCCGTCATGATCGTCATCCTCTCCACCGGCCACATCTCCGGTGCTCATCTCAACCCCGCCGTCACCATCTCCTTTGCTTCATTAAAGCACTTCCCATGGAAACACGTGCCAGTGTATATTGGAGCACAAATAGTGGCGGCAATATGCGCTGCATTTGCACTGAAGGGAATATTTCACCCATTCATGAGCGGGGGAGTGACGGTTCCTTCAGGAGGATATGCCCAGGCTTTTGCTTTGGAGTTCATCATCTCCTTCAACCTCATGTTCGTCGTCACCGCCGTCGCCACCGATACCAGAGCTGTGGGAGAGCTTGCGGGAATCGCGGTGGGAGCGACTGTGATGCTCAACATACTCATTGCTGGGCCAGCCTCAGGAGGCTCAATGAACCCAGTAAGAACCCTAGGTCCAGCCATTGCAGCAAACAACTACAGAGCCATATGGGTATATCTCATGGCTCCCATAATCGGAGCCCTAGGTGGGGCTGGGACCTACACTCTGGTGAAGCTCTCTGATGAACAAGAAGAAGACGCCAAGGGAAAGACCTCCATGCCTGGCAGCTTCAGAATGTGA 927 0.5178 MDNNEEIPSVPSTPATPGTPGRPLFGGFRSERTKGNGFGNKSLLTNCKCFGVKEWTVEEGALPTVSCTLPPPPIPLAKKVGAEFIGTFILMFAGTAAAIVNQKTNGSETLIGCAATTGLAVMIVILSTGHISGAHLNPAVTISFASLKHFPWKHVPVYIGAQIVAAICAAFALKGIFHPFMSGGVTVPSGGYAQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPASGGSMNPVRTLGPAIAANNYRAIWVYLMAPIIGALGGAGTYTLVKLSDEQEEDAKGKTSMPGSFRM 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2143 308 ProSitePatterns MIP family signature. 135 143 IPR022357 -
Bisa06g2143 308 Gene3D Glycerol uptake facilitator protein. 73 300 IPR023271 -
Bisa06g2143 308 MobiDBLite consensus disorder prediction 1 31 - -
Bisa06g2143 308 Pfam Major intrinsic protein 77 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g2143 308 PRINTS Major intrinsic protein family signature 154 173 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g2143 308 PRINTS Major intrinsic protein family signature 266 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g2143 308 PRINTS Major intrinsic protein family signature 198 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g2143 308 PRINTS Major intrinsic protein family signature 229 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g2143 308 PRINTS Major intrinsic protein family signature 78 97 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g2143 308 PRINTS Major intrinsic protein family signature 117 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g2143 308 FunFam Aquaporin NIP2-1 66 298 - -
Bisa06g2143 308 CDD MIP 78 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g2143 308 PANTHER AQUAPORIN NIP2-1 54 291 IPR034294 -
Bisa06g2143 308 SUPERFAMILY Aquaporin-like 75 289 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2143 Bisa-ChrBisa06 65723901 65727100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2143 3 307 Major Intrinsic Protein MIP AT1G80760 75.000 7.59e-163 454