Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2128 ATGATGGAGAGAGACTATGGTGGAACGTACATAAAGAAAGGCCCATGGACTGCTGAAGAAGATGAGGTCCTCATGAACCATGTCAAGAAAAGCGGTCCAAGGGACTGGAGCTCCATTCGATCCAAAGGCTTGTTGCCCCGAACAGGAAAATCGTGTCGCCTTCGTTGGGTTAACAAGCTTAGACCCAACTTGAAGACAGGTTGCAAATTTTCAGCAGAGGAAGAAAGGGTGGTGATAGAATTGCAGGCACAGTTTGGGAACAAATGGGCCAAAATAGCGACCTACCTGGAAGGCAGAACTGACAACGATGTGAAGAACTTTTGGAGTAGCAGAAGAAAAAAGTTGGAGAGGATGTTGCAGAAACCTTCTCCTTCAAAGCCACACAGAATCAAAGGGAAAGCTCCTCTTGATCAACTACTAGTTGAAGAGGTTCCCTCATGCAGTTCCAATTGTGTAGAGGAAAAGGCGCCAAGTGCGGACTACAAGTACCTTTGTTATATGGGAAACACAGAGACAGAGGAGGTGAATATGGCAAAGGCAGAGTTGCAAAACTCGGAAGCTGAAGAGGCCACCCAGCTTCCCATGGTACCATCATTTGAGTCTTCATCAGAGTACACCTTCTCTCAAGTGCTCCCTGAGCCCCACCAAGTGGACTTCCCACTCCTCCCGGACTGCCATGGCCTCACGGATCCCGAGCCCTTCGATGACGCCAACTTCCTTGACATTTTCGAGCAGCAGAAGGTCTCGGACTGCGGGTGCAGTGGCCACAAGATTGGGACCAAGTTGCCATATCTTGCACTGGAAGGGAATGCTCAGACTTCAACTCCTGCAAATGCCTTCTTTGAGGACTTCCCCACTGAGATATTTGATTACTTTGAAGACCCTCCACCCTCATCACTAAAATAA 906 0.4857 MMERDYGGTYIKKGPWTAEEDEVLMNHVKKSGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSAEEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSSRRKKLERMLQKPSPSKPHRIKGKAPLDQLLVEEVPSCSSNCVEEKAPSADYKYLCYMGNTETEEVNMAKAELQNSEAEEATQLPMVPSFESSSEYTFSQVLPEPHQVDFPLLPDCHGLTDPEPFDDANFLDIFEQQKVSDCGCSGHKIGTKLPYLALEGNAQTSTPANAFFEDFPTEIFDYFEDPPPSSLK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2128 301 SMART sant 66 114 IPR001005 -
Bisa06g2128 301 SMART sant 12 62 IPR001005 -
Bisa06g2128 301 Coils Coil 170 190 - -
Bisa06g2128 301 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bisa06g2128 301 Gene3D - 12 65 - -
Bisa06g2128 301 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa06g2128 301 Gene3D - 68 135 - -
Bisa06g2128 301 PANTHER TRANSCRIPTION FACTOR DUO1 5 299 - -
Bisa06g2128 301 Pfam Myb-like DNA-binding domain 69 109 IPR001005 -
Bisa06g2128 301 Pfam Myb-like DNA-binding domain 13 58 IPR001005 -
Bisa06g2128 301 CDD SANT 69 108 IPR001005 -
Bisa06g2128 301 CDD SANT 15 60 IPR001005 -
Bisa06g2128 301 FunFam MYB transcription factor 13 65 - -
Bisa06g2128 301 FunFam Transcription factor GAMYB 68 136 - -
Bisa06g2128 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 56 IPR017930 -
Bisa06g2128 301 ProSiteProfiles Myb-like domain profile. 69 112 IPR001005 -
Bisa06g2128 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2128 Bisa-ChrBisa06 65504374 65506373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2128 11 160 MYB Transcription Factor Family AT3G60460 66.467 5.00e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa06g2128 Myb_DNA-binding 6e-11 CL0123