Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa06g2123 | ATGGCCAGACCTCATCAACAACGCTATCGCGGCGTTCGCCAGCGCCATTGGGGCTCTTGGGTCTCCGAGATTCGCCATCCTCTCCTGAAGACCAGAATTTGGCTTGGCACATTCGAAACGGCGGAAGATGCAGCGAGAGCATACGATGAAGCAGCGAGATTCATGTGCGGCCCAAAAGCCCGAACCAACTTTCCGTACGAGCCCAATGGGCCTAATTCATCCTCGTTGTCTTCTTCTTCTTCTTCTTCCTCGTCCAAGCTCCTCTCTGCAACTTTAACGGCCAAGCTTCACAAGTGTCACATGGCGTCCCTTTCCCTTCAGATGAAGCAGCGATCCCAGAAAGAGCCTCAGCAACAACCCCAGAGCTCTGATGCCACTCGATTTGCCTCCGGTGACGCCGGAGTGGGCCCGGAGGTAGGGTTCCGGTGGTCAGACGATGGTCACGAGGGGAAGGAGCAGCCGTGTCAGGCGGTGCTTGAAGATGATGACATAGAGCAGATGATTCAGGAGATGCTTCATTATGGCTCAATTGAGCTTTGCTCTCTTGACTCTGCTAATTAA | 561 | 0.5401 | MARPHQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARFMCGPKARTNFPYEPNGPNSSSLSSSSSSSSSKLLSATLTAKLHKCHMASLSLQMKQRSQKEPQQQPQSSDATRFASGDAGVGPEVGFRWSDDGHEGKEQPCQAVLEDDDIEQMIQEMLHYGSIELCSLDSAN | 186 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa06g2123 | 186 | PRINTS | Ethylene responsive element binding protein signature | 9 | 20 | IPR001471 | GO:0003700|GO:0006355 | |
| Bisa06g2123 | 186 | PRINTS | Ethylene responsive element binding protein signature | 31 | 47 | IPR001471 | GO:0003700|GO:0006355 | |
| Bisa06g2123 | 186 | FunFam | Ethylene-responsive transcription factor 2 | 7 | 67 | - | - | |
| Bisa06g2123 | 186 | SUPERFAMILY | DNA-binding domain | 8 | 66 | IPR016177 | GO:0003677 | |
| Bisa06g2123 | 186 | CDD | AP2 | 7 | 66 | IPR001471 | GO:0003700|GO:0006355 | |
| Bisa06g2123 | 186 | Gene3D | AP2/ERF domain | 7 | 66 | IPR036955 | GO:0003700|GO:0006355 | |
| Bisa06g2123 | 186 | MobiDBLite | consensus disorder prediction | 108 | 128 | - | - | |
| Bisa06g2123 | 186 | Pfam | AP2 domain | 8 | 57 | IPR001471 | GO:0003700|GO:0006355 | |
| Bisa06g2123 | 186 | ProSiteProfiles | AP2/ERF domain profile. | 8 | 65 | IPR001471 | GO:0003700|GO:0006355 | |
| Bisa06g2123 | 186 | MobiDBLite | consensus disorder prediction | 108 | 154 | - | - | |
| Bisa06g2123 | 186 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C | 7 | 126 | - | - | |
| Bisa06g2123 | 186 | SMART | rav1_2 | 8 | 71 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa06g2123 | Bisa-ChrBisa06 | 65413133 | 65414746 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa06g2123 | 1 | 182 | AP2-EREBP Transcription Factor Family | AT5G25190 | 61.497 | 6.27e-71 | 211 |
Transcription factors information