Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2062 ATGGCCATTGCATCTCTCACTTTCCCTTCTCTGCTCCCACCGTCCTCTTCGTCTGACTTCTTGAGTGGGGTCTATCTCCGATCTCATAAAAGCTTCACCTCTATCCATCCACCTTCGTCGACATTAAGAACAAAGGTCTCTTCTAGGCGCCTGGGAATAGTAGCTATTGCTTCTGGCGACTATTATGCTACTCTTGGAGTCTCCAAATCTGCGACAAGCAAGCAAATCAAAGCTGCTTATAGAAGGTTAGCTCGCCAGTACCATCCTGATGTGAACAAGGAGCCCGGAGCTACTGAAAAGTTCAAAGAAATTAGTGCTGCGTATGACGTGCTATCAGATGATAAAAAGAGGGCTTTATATGATCAATATGGAGAGGCTGGAGTTAAGAGCACAGTGGGAGGAGCATCTTATACGACTAATCCATTTGATTTATTTGAGACGTTTTTTGGGCCAAGTATGGGTGGCTTCCCTGGCATGGATCCAACTGGATTTGGAACACGCCGACGCAGTACTGTTACTAAGGGTGAAGATATCCGTTATGACATCTCCTTGCAATTTTCTGAGGTGATTTTTGGAGCAGAGAAAGAATTTGAGCTTTCCCATTTGGAAACGTGTGAAGTTTGTGTTGGTACTGGAGCAAAGATGGGCTCCAAGATGGGAATATGTGCAACTTGTGGTGGGAGGGGTCAGGTGATGAGGACGGAACAAACACCTTTTGGAATGTTCTCACAGGTTTCATTATGTCCAAACTGTGGAGGTGATGGTGAAGTCATATCCGAATATTGCGGTAAATGCAGCGGAAAAGGACGTCTACGGGTTAAGAGAACGATTAAAGTTAAGATTCCTCCTGGGGTTAGCTCAGGCAGTATATTGAGAGTTGCTGGGGAGGGTGATGCTGGACCAAGAGGGGGCCCTCCAGGAGATCTTTATGTGTATCTTGATGTGGAAGAAATACCAGGAATTCAAAGAGATGGCATTAATCTCTGCTCAACAATATCAATGAGTTACCTAGAGGCCATACTTGGTGCCATTGTCAAGGTAAAGACAGTTGAAGGCATTTCTGAACTACAAATACCTCCTGGAACCCAACCAGGAGATATCCTTGTCCTTGCAAGGAAAGGTGCACCAAAATTAAACAAACCATCAATACGTGGTGATCATTTATTTACCGTTAAAGTCACAATACCAAAACGTATCAGTACAAAGGAACGTGAGCTGCTTGAAGAACTTGCTTTGCTGGGCAACAACACAAGAAGCAACCGTTCAAAACCTCGTCCTACAACTCAATCTTCTACAGGTAAAGGAGGTACTGAAGGTCCAGCATCTCAAATTACTGAAAGTCCAGCAGCAACGGTTGCAGAAAAAGCAGGTAATGGAGGTACTGAAGGTCCAGCATCTCAAATTACTGGAAGTCCAGCAGCAACGGTTGCAGAAAAAGCTGAACAATTAGAAGATCAAAATGATATATGGAAGAAGTTTACGGATTTTGCTGGGTCTGTTGCAAATGGAGCTTTTAAGTGGTTAAAAGATAATCTCTAG 1539 0.4399 MAIASLTFPSLLPPSSSSDFLSGVYLRSHKSFTSIHPPSSTLRTKVSSRRLGIVAIASGDYYATLGVSKSATSKQIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYDVLSDDKKRALYDQYGEAGVKSTVGGASYTTNPFDLFETFFGPSMGGFPGMDPTGFGTRRRSTVTKGEDIRYDISLQFSEVIFGAEKEFELSHLETCEVCVGTGAKMGSKMGICATCGGRGQVMRTEQTPFGMFSQVSLCPNCGGDGEVISEYCGKCSGKGRLRVKRTIKVKIPPGVSSGSILRVAGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGINLCSTISMSYLEAILGAIVKVKTVEGISELQIPPGTQPGDILVLARKGAPKLNKPSIRGDHLFTVKVTIPKRISTKERELLEELALLGNNTRSNRSKPRPTTQSSTGKGGTEGPASQITESPAATVAEKAGNGGTEGPASQITGSPAATVAEKAEQLEDQNDIWKKFTDFAGSVANGAFKWLKDNL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2062 512 CDD DnaJ_C 176 399 - -
Bisa06g2062 512 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 32 420 - -
Bisa06g2062 512 NCBIfam molecular chaperone DnaJ 60 411 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bisa06g2062 512 Gene3D - 175 311 - -
Bisa06g2062 512 CDD DnaJ 60 113 IPR001623 -
Bisa06g2062 512 Gene3D DnaJ domain 57 158 IPR036869 -
Bisa06g2062 512 SUPERFAMILY Chaperone J-domain 58 164 IPR036869 -
Bisa06g2062 512 FunFam Putative Mitochondrial DnaJ chaperone 266 311 - -
Bisa06g2062 512 FunFam Chaperone protein dnaJ A6 chloroplastic 205 269 - -
Bisa06g2062 512 CDD DnaJ_zf 205 269 IPR001305 GO:0031072|GO:0051082
Bisa06g2062 512 MobiDBLite consensus disorder prediction 413 449 - -
Bisa06g2062 512 ProSiteProfiles Zinc finger CR-type profile. 192 274 IPR001305 GO:0031072|GO:0051082
Bisa06g2062 512 ProSiteProfiles dnaJ domain profile. 60 124 IPR001623 -
Bisa06g2062 512 Pfam DnaJ central domain 205 269 IPR001305 GO:0031072|GO:0051082
Bisa06g2062 512 Pfam DnaJ domain 60 121 IPR001623 -
Bisa06g2062 512 Hamap Chaperone protein DnaJ [dnaJ]. 57 447 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bisa06g2062 512 Pfam DnaJ C terminal domain 178 396 IPR002939 -
Bisa06g2062 512 Gene3D - 321 412 - -
Bisa06g2062 512 MobiDBLite consensus disorder prediction 413 480 - -
Bisa06g2062 512 FunFam Chaperone protein dnaJ A6 chloroplastic 57 161 - -
Bisa06g2062 512 PRINTS DnaJ domain signature 62 80 IPR001623 -
Bisa06g2062 512 PRINTS DnaJ domain signature 116 135 IPR001623 -
Bisa06g2062 512 PRINTS DnaJ domain signature 96 116 IPR001623 -
Bisa06g2062 512 PRINTS DnaJ domain signature 80 95 IPR001623 -
Bisa06g2062 512 SMART dnaj_3 59 116 IPR001623 -
Bisa06g2062 512 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 192 272 IPR036410 -
Bisa06g2062 512 Gene3D - 205 269 - -
Bisa06g2062 512 FunFam Molecular chaperone Hsp40/DnaJ family protein 321 413 - -
Bisa06g2062 512 SUPERFAMILY HSP40/DnaJ peptide-binding domain 173 325 IPR008971 GO:0006457|GO:0051082
Bisa06g2062 512 ProSitePatterns Nt-dnaJ domain signature. 101 120 IPR018253 -
Bisa06g2062 512 SUPERFAMILY HSP40/DnaJ peptide-binding domain 322 407 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2062 Bisa-ChrBisa06 64413207 64420618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2062 61 192 C2H2 Transcription Factor Family AT1G74250 32.432 4.43e-11 63.5